Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0562 |
Symbol | |
ID | 4202135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 670467 |
End bp | 671099 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081444 |
Product | hypothetical protein |
Protein accession | YP_695016 |
Protein GI | 110798904 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAATT TAAATCCTAA AGACGATAAA TTTTATGATA TGTTTATCGA TGAAGCAAAA AATGTAGAAA AAGCAGCAGT AATATTAAGT GAAGCCTTAG GGGATCTTGA AAATAAAACA AGCCACGTGG CTAGAGTTGA AGAGTTAGAA CATAAAGGAG ATGAAATAGT TCATAGACTT ATAGAAGAAC TAAACAATTC TTTTATAACT CCTATTGATA GAGAAGATAT ATTTTCTATA ACAAAAAGAA TGGATGATAT TTTAGATTCA ATAGAAAGTA CTATGCATAG ATTCACTATG TTCAACATAA ATGAATCTAA AGAAGGTGCT AAAGTTTTAG GAAGCTTAAT AGTTGATGCA TCAAGAGAAT TAGTATCTCT AATGGAAGAA TTTAAGCATA TGAAAAAGAA AAATAAAGAA ATTACAGAGA GAGTAATTTC AATAAATAAA ATAGAAAACA AAGGAGATAT TTTCTATAGA CAAATGATAT CAGAATTATT TGCTGAAGAT GGAAAAACTC CAGTTCTTGA TATAATAAAA TGGAGAGAAA TATATAAATT CTTAGAGGCA ACTTTAGATA GTTGTGAGGC TGTAGCCAAT ATAGTTGAGG GAGTAGTGAT GAAGTATGTC TAG
|
Protein sequence | MFNLNPKDDK FYDMFIDEAK NVEKAAVILS EALGDLENKT SHVARVEELE HKGDEIVHRL IEELNNSFIT PIDREDIFSI TKRMDDILDS IESTMHRFTM FNINESKEGA KVLGSLIVDA SRELVSLMEE FKHMKKKNKE ITERVISINK IENKGDIFYR QMISELFAED GKTPVLDIIK WREIYKFLEA TLDSCEAVAN IVEGVVMKYV
|
| |