Gene CPF_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0559 
Symbol 
ID4203016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp667634 
End bp668329 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content31% 
IMG OID638081441 
ProductDedA family protein 
Protein accessionYP_695013 
Protein GI261876145 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.604285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA TAGTTAAACC TTGGGTTGCT ACCTTAATTA TTTTAATAGT AGCTTTTTTG 
GTGTATTTTT TTGTTCCAAC TGCTAATAGT AAAATAAATC AGATGATATT TTACTTAAGT 
AGTATGAATT TAGATATGAT AAAGGAATAT ATATTATCTT TTGGAATATG GGCACCTATA 
ACATCATTTT TATTAATGGT ACTTCAATCT GTAATAGCAC CAATACCAGC TTTTTTAATA 
ACCTTAAGTA ATGCAGCTAT ATTTGGATGG GTTAAGGGTG CTATATTATC ATGGAGTAGT 
GCCATGGCTG GGGCAGCACT ATGTTTTTAT ATAGCAAGAG GCTTAGGAAG AGATGCCGTT 
GAAAAGTTAA CTAGTAAATT TGCTTTAAAG GATATAGATG GTTTCTTTGA AAAGTATGGT 
AAACATACTA TACTAATAGC AAGATTGCTA CCTTTTATAT CTTTTGACTT AGTTAGTTAT 
GCTGCAGGAC TTACATCAAT GAATTTTTGG TCATTTTTCA TTGCTACAGG TATTGGTCAA 
TTACCTGCCA CAATAGTATA TTCTTATGTT GGTGGTATGC TTACTGGGGG AGCACAATTA 
CTTATGAGTG GACTTTTAAT TTTATTTGCT TTAAGTATAG CAATATATGT AGGGAAAAAA 
GTTTGGAATG AGAAAAGAGG TAAAAATGAC AAATAA
 
Protein sequence
MKKIVKPWVA TLIILIVAFL VYFFVPTANS KINQMIFYLS SMNLDMIKEY ILSFGIWAPI 
TSFLLMVLQS VIAPIPAFLI TLSNAAIFGW VKGAILSWSS AMAGAALCFY IARGLGRDAV 
EKLTSKFALK DIDGFFEKYG KHTILIARLL PFISFDLVSY AAGLTSMNFW SFFIATGIGQ 
LPATIVYSYV GGMLTGGAQL LMSGLLILFA LSIAIYVGKK VWNEKRGKND K