| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0557 |
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| Symbol | |
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| ID | 4201351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 665589 |
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| End bp | 666515 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081439 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_695011 |
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| Protein GI | 110801006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAGTA ATAAAAGAAA AATATTTTTA GCAATGTGTG TGTTGCCTGC ACTTATACTA
TTTACAATAT TTATGTTATA CCCAATTGGA AAAGGTTTCA TGATGTCTTT ATATGAATGG
AGTGGGATTT CAGGAGAACC AGTATTTGTG GGGTTAGATA ACTTTAAAGC ACTTTTAAAT
GATAGATATT TTAAGGAAGC ATTTGGGAAT ACATTTTTCA TAATAGTTTT ATTTCCAGCA
ATAACAATAA CCCTTTCTTT ATTCTTAGCT GTAGTAATAA CTCAAAGTAA GTTAAAAGAA
AAGAATTTCT ACAGAGTTAT ACTATTTTTC CCAAATATAT TATCAATGGT TGTTATAGGG
GTTTTATTTA CATATGTTTA TGACCCATCA ATAGGAATTC TTAAAGCATT TTTTGAAATG
ATAGGACTAG ATAAGTTAGC AGGTCTGGCA TGGCTTGGAG ATTCAAAATT AGTTCTATGG
GCATTAGTTA TAACTATGGT ATGGCAAGCT GTTGGTTATT ATATGGTAAT TTATATAGCT
GGATTAGATG GAATATCACC TTCACTTTAT GAAGTTTGTT ATTTAGAAGG AGCTTCAGCT
TGGCAAAAGT TTAGATATGT AACATTACCA CTTTTATGGG ATGTAGTTAG AGTAACCTTT
GCATTCTTTA TTACAGGGGC ACTAAATCTA AGCTTTATCT TTGTAACTGT AATGACTAAG
GGTGGACCAA ATGGAAAATC AGAGGTTTTA TTGACATATA TGTATAAACA AGCCTTTACA
AATTCTCAAT ATGGATATGC TATGGCAGTT GGGGTAACTA TATTTGCCTT TGCTATGATC
CTTGCATTAA TAATCAATAA ATTAAGTGAC TCTGATGCAA GGGAAGAAAA GAGAGTAAAA
AGATTACAAC AGAAGGGAGT GATATAA
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| Protein sequence | MNSNKRKIFL AMCVLPALIL FTIFMLYPIG KGFMMSLYEW SGISGEPVFV GLDNFKALLN
DRYFKEAFGN TFFIIVLFPA ITITLSLFLA VVITQSKLKE KNFYRVILFF PNILSMVVIG
VLFTYVYDPS IGILKAFFEM IGLDKLAGLA WLGDSKLVLW ALVITMVWQA VGYYMVIYIA
GLDGISPSLY EVCYLEGASA WQKFRYVTLP LLWDVVRVTF AFFITGALNL SFIFVTVMTK
GGPNGKSEVL LTYMYKQAFT NSQYGYAMAV GVTIFAFAMI LALIINKLSD SDAREEKRVK
RLQQKGVI
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