Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0550 |
Symbol | |
ID | 4202039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 655789 |
End bp | 656781 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081432 |
Product | cell wall binding repeat-containing protein |
Protein accession | YP_695004 |
Protein GI | 110800410 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.515915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA ATCACAAAAT AACATCGATT GTATTAACAC TTGGACTAAT ATCTTCAAGC ATATATACAA TCAATGTAAA TGCAGAAACA CTTAATTCGA AAATCCAAGT ATCAAACTTA AATTTATCTA ACTCATATAA CATAAAAAAT GAAAATTTAA TTAAATCTTC TAAAGAAGGT TGGATTAATA CAAATGGAAT ATGGTACTTC TATAAAAATG GAATTATACA AACTGGTTGG CTAAATGATA ATGGTATTTG GTACTATTTA AATGAAAATG GCTCTATGGC TACAGGTTGG TATAAAGTTG ATTCTAACTG GTATTATTCA AATTCTAACG GAGTTATGCA AACTGGCTGG CTAAATGATA ATGGCAATTG GTACTATTTA AATGACAATG GTTCTATGGC TACAGGTTGG TATAAAGTTG ATTCTAACTG GTATTATTCA AATTCTAGCG GAGTTATGCA AACTGGCTGG CTAAATGATA ATGGCAATTG GTACTATTTA AACGACAATG GTTCTATGGC TACATGTTGG TATAAAGTTG ATTCTAACTG GTATTATTCA AATTCTAATG GAGTTATGCA AACTGGTTGG TTAAATGACA ATGGTACTTG GTACTATTTA AACGACAATG GCTCTATGGC TACAGGTTGG TATAAAGTCT ATTCTAAATG GTATTATTCA AATTCTAACG GAGTTATGCA AACTGGCTGG CTAAATGACA ATGGTACTTG GTACTATTTA AATAGTTCTG GTGAGATGGT TACTAACACA ATTATTGATG GTTGGAAAAT AGATTCTAAC GGTATAGCAA CGCCATTAAA AGATGAAAAC CATTCTATTG TATATGTAAC TCCAAACGGT AAAAGCTATC ACTATAGCAA AGATTGTACA GCCTTAAAAA GAAGCTCTTC TATCCTTAGC ATGAGCCTTA ATGAAGCTAT AAATAAAGGA AAATCTGATC CTTGTAACTT GTGTGTTAAA TAA
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Protein sequence | MKINHKITSI VLTLGLISSS IYTINVNAET LNSKIQVSNL NLSNSYNIKN ENLIKSSKEG WINTNGIWYF YKNGIIQTGW LNDNGIWYYL NENGSMATGW YKVDSNWYYS NSNGVMQTGW LNDNGNWYYL NDNGSMATGW YKVDSNWYYS NSSGVMQTGW LNDNGNWYYL NDNGSMATCW YKVDSNWYYS NSNGVMQTGW LNDNGTWYYL NDNGSMATGW YKVYSKWYYS NSNGVMQTGW LNDNGTWYYL NSSGEMVTNT IIDGWKIDSN GIATPLKDEN HSIVYVTPNG KSYHYSKDCT ALKRSSSILS MSLNEAINKG KSDPCNLCVK
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