Gene CPF_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0534 
Symbol 
ID4203726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp633592 
End bp636261 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content31% 
IMG OID638081416 
Productcopper-translocating P-type ATPase 
Protein accessionYP_694988 
Protein GI110799828 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.541541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTA TAATTTTTAT GATAAATAAA TCAATTAAAA TAAAAGGTAT GAGTTGTGCC 
GCTTGTGCTG CTAGAATCGA AAAAGTTCTA GGTAAAATGG ATGGCATATC AAAAGCTAAT
GTTAATTTGG CAACTGAAAA ATTAAATTTA GAGTTTGATG AAAATAAAAT ATCCTTCAAA
GAAATAGAAG AAAAAATAAA TAAGCTAGGT TTCTCAGTAG TTAGAAACTT AAAGAAAGAA
TCTTTCAAAG TTTCTGGAAT GAGTTGTGCT TCCTGCGCAT CTAGAATTGA GAAAGTTTTA
AATAAATTAT CTGGAATATA TAATGCTACT GTTAACTTTG CTAATGAAAG CCTTCAAGTT
GAATATGATG AAGATGAAAT TTCCTTAAAA GAAATTAAAG AAAAAGTAAA GAAACTAGGC
TTTGAACTAA AAGGAAATAA TAAGTCTACT TCCTTTAAGG TAGAAGGAAT GACTTGTTCA
GCCTGTGCAG CTAGAATTGA AAAGGTAACA AGTAAAATGG ATGGTGTTGA AAGTTCTAAT
GTTAACTTCG CAAATTCTAC TCTTAATATT TCTTTCGATA AAGATAAAGT TTCTGCTAAT
GATATAAAAG CAAAGGTAGA AAAATTAGGA TATAAACTTT TAGATGCATC TCAAGAAGAT
GAACATGAAA AAGCAAAAGA GAATGAAACT AAAAGAATGA AAAATAGACT TATTGGCTCA
GCAATATTCA CAATTCCATT ATTCATAATA TCAATGGGAC ATATGGTTGG CCTTCATTTA
CCTAATATAA TAGATCCGAT GCATAATCCC TTAAACTTTG CACTTATTCA ATTACTTCTT
ACAACTGTGG TTATATTCAT ATGTAGAGAT TTCTTTATAC ATGGTTTTAA GAATTTATTT
ATGAGAAGTC CTAATATGGA TTCCTTAATA GCTATAGGAG CTGGTGCTGC ATATGTTTAT
GGATTATTTG CAATATACCA CATTTATATG GACGATAGTA ACTATGCTAT GCAGTTATAT
TTTGAATCTG CTGGAACAAT ACTTACATTA ATAAGTTTAG GTAAATACTT AGAAACTTTA
ACTAAAGGTA AAACTTCTGA TGCAATAAAA AAACTTATGG GATTAGCCCC TAAAACAGCC
ACTCTACTTG TAGATGGAAA AGAAAAAATT GTATCTATTG ATGAAGTTAA AGTTTTTGAT
TTAGTACTTG TTAAGCCAGG TGAGAAATTG CCTGTAGACG GTAAAGTTGT AGAAGGATAT
ACATCAATTG ATGAAAGTAT GCTAACTGGA GAAAGTATTC CTGCTGAAAA AAAAGTAGGA
GATACAGTCT TTGGAGCTAG TATAAATAAA AATGGAAGAA TAATTTATGA AGCTACAAAG
GTTGGTAAGG ATACTGTAAT CTCTCAAATA GTTAAATTAG TAGAAGATGC CCAAGGATCA
AAAGCTCCAA TTGCCAAATT AGCTGATACT ATTTCAGGTT ATTTTGTACC TATAGTAATA
TCTTTAGCAG TAATTGCAAG TTTAGCTTGG TATTTCTCTG GTGAAAGTAA AACTTTTGCA
CTTACAATCT TTATATCTGT ATTAGTAATT GCTTGTCCAT GCGCTTTAGG TTTAGCTACC
CCAACAGCTA TTATGGTTGG TACAGGTAAG GGAGCTGAAA ATGGAATACT TATTAAAAGT
GGTGAAGCTT TAGAAAGCAC ACAAAACTTA AATACTGTTG TCTTCGACAA AACAGGAACT
ATAACTGAAG GAAAACCTAG GGTTACAGAT ATTATTTGTG AAAATATTTC AAAAGATGAA
CTCCTTTTAT TAGCAGCCTC AGCAGAAAAA GGTTCAGAAC ATCCTCTTGG AGAAGCTATT
GTTAGAGATG CTGAAGAAAA AAATATCAAA CTAAAAAATG TTTTAGATTT TGAAGCAATA
CCTGGTAAGG GAATTAAGTG CTCTATTGAA AATAAATCAA TTTTATTAGG TAACTATAAA
CTTATGAAAG ATAAAAATAT AAATCTTAAA AATTTATTAG AGACTTCTGA AGAACTAGCT
TCAAAGGGAA AAACTCCTAT GTTTATTGCT ATTAATGAAA AAATAGCTGG TATAATCGCC
GTTGCTGATA CTGTTAAAGA AACAAGTAAA AAAGCTATAG AAACCCTACA AAAAATGGGA
CTTGAAGTAG TAATGTTAAC AGGAGATAAT TTAAAAACAG CTAAGGCTAT TGCAAAAGAA
GTAGGTGTAG ATAGAGTTAT CGCTGAGGTT CTTCCTCAAG AAAAGGCTGA AAAAATTAAA
ACCATTCAAG ATGAAGGCAA AAAAGTCGCT ATGGTTGGTG ATGGAATAAA TGATGCTCCT
GCTTTAGCTA TTTCTGACAT TGGAATGGCT ATAGGTTCAG GTACTGATAT AGCTATGGAG
TCTGCTGATA TAGTTCTAAT GAAAGGTGAT ATATTACATG TTGTTGGTGC TATTCAATTA
AGCAGGCAAA CAATGAAAAA TATAAAGGAA AACTTATTCT GGGCCTTTGG ATACAATACT
TTAGGTATTC CAGTAGCAAT GGGAGTTCTT CATATATTTG GAGGCCCATT ACTTAATCCA
ATGATAGGTG CCTTTGCCAT GAGCTTTAGT TCAGTATCAG TATTATTAAA TGCCTTAAGA
CTAAAAAAAT TCAAACCAAA CTATAAATAA
 
Protein sequence
MSAIIFMINK SIKIKGMSCA ACAARIEKVL GKMDGISKAN VNLATEKLNL EFDENKISFK 
EIEEKINKLG FSVVRNLKKE SFKVSGMSCA SCASRIEKVL NKLSGIYNAT VNFANESLQV
EYDEDEISLK EIKEKVKKLG FELKGNNKST SFKVEGMTCS ACAARIEKVT SKMDGVESSN
VNFANSTLNI SFDKDKVSAN DIKAKVEKLG YKLLDASQED EHEKAKENET KRMKNRLIGS
AIFTIPLFII SMGHMVGLHL PNIIDPMHNP LNFALIQLLL TTVVIFICRD FFIHGFKNLF
MRSPNMDSLI AIGAGAAYVY GLFAIYHIYM DDSNYAMQLY FESAGTILTL ISLGKYLETL
TKGKTSDAIK KLMGLAPKTA TLLVDGKEKI VSIDEVKVFD LVLVKPGEKL PVDGKVVEGY
TSIDESMLTG ESIPAEKKVG DTVFGASINK NGRIIYEATK VGKDTVISQI VKLVEDAQGS
KAPIAKLADT ISGYFVPIVI SLAVIASLAW YFSGESKTFA LTIFISVLVI ACPCALGLAT
PTAIMVGTGK GAENGILIKS GEALESTQNL NTVVFDKTGT ITEGKPRVTD IICENISKDE
LLLLAASAEK GSEHPLGEAI VRDAEEKNIK LKNVLDFEAI PGKGIKCSIE NKSILLGNYK
LMKDKNINLK NLLETSEELA SKGKTPMFIA INEKIAGIIA VADTVKETSK KAIETLQKMG
LEVVMLTGDN LKTAKAIAKE VGVDRVIAEV LPQEKAEKIK TIQDEGKKVA MVGDGINDAP
ALAISDIGMA IGSGTDIAME SADIVLMKGD ILHVVGAIQL SRQTMKNIKE NLFWAFGYNT
LGIPVAMGVL HIFGGPLLNP MIGAFAMSFS SVSVLLNALR LKKFKPNYK