| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0465 |
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| Symbol | |
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| ID | 4202072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 552224 |
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| End bp | 552877 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081349 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | YP_694922 |
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| Protein GI | 110799248 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000141765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATAT TAGAAAATAA TCCAAAATCA GTGGCAGCTG AAAGTTATAG AACCTTAAGA
ACAAACATAC AATACTCTTC CTTTGATAAT CCAGTAAAAT CTATTGTTAT TACTAGTTCT
GAGCCAGGAG AAGGAAAGTC AACAACAAGT GCTAACTTAG CTCTTTCCTT TGCGCAAGAT
GGAAAAAAGG TAATTCTTAT AGATTGTGAT TTAAGAAAAC CAGTTGTACA TAAAGAATTT
CAAATTAGTA ATTCTAGAGG ATTATCAGAA TTTTTAATTG GAAATGTTGA ATTTTCTAAG
GTGGTTTACA AACATGAATC AGGACTTCAT GTACTACCTT CAGGATTAGT TCCTCCAAAC
CCTGCTGAGA TGTTAGCTTC AAGAGCTATG GAACATCTTT TAACTCAATT AGAGGAAAAA
TATGATTACA TAATATTAGA TACTCCTCCA GTTAATGCAG TAACAGATTC AAAAATACTT
TCAACAAAGG TAGATGGAAC AATACTAGTT GTAAAGTATG GATATACAAA AAAGGATGCT
GTAATTGAAG CTGTAAAGGG CTTAAGGGCA GTTAATGCTA ATATAATAGG AACAGTATTT
AATGGAGAGG AAAATCAAAG GGGAAAATAC TATCATTATT ATAAAAAAGA TTAA
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| Protein sequence | MLILENNPKS VAAESYRTLR TNIQYSSFDN PVKSIVITSS EPGEGKSTTS ANLALSFAQD
GKKVILIDCD LRKPVVHKEF QISNSRGLSE FLIGNVEFSK VVYKHESGLH VLPSGLVPPN
PAEMLASRAM EHLLTQLEEK YDYIILDTPP VNAVTDSKIL STKVDGTILV VKYGYTKKDA
VIEAVKGLRA VNANIIGTVF NGEENQRGKY YHYYKKD
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