Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0448 |
Symbol | |
ID | 4203805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 533302 |
End bp | 533970 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 638081332 |
Product | hypothetical protein |
Protein accession | YP_694905 |
Protein GI | 110800425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00788476 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TAATTATTAA AGACTTAAAA AATATAAGAG TAATATTTAT ATTTTATATC CTTACAATGA CTTTTGGATA TTCTCCTTTT TTTATAGACT TACCGAAAGA TAGATATGAT TTTTTAATAA ATAGTGTTTT CATTTATTTT ACCTTGTTAG CTTCAATGAT TAGTGTTAAT TTTATAATTG CAAAAAATAC TAATAAAGGA GCAATGACAA ATAAATTATT AAGATCACTG CCAATTGATG CAAGAAGTGT AGTAGGCACA TCTTTTATAT TACCTATATT AATTTTTTTA ATATTTTCTT TACCAAATAT ATTAGTAGGT ATGGGTGTAA GTTTTATGTT AGGAGAAAAA ATCATTGTAA ATCCATTTAA TTTACTTTTA ACATTTATAA TTTTCTATAT ATATGCATCA ATAACATTTA GTATGGCAAT TATATACCCA GAGAGCAGTG TAGTATCTTA TTTAAGAAGC GTTCCATTAT TTATATTAAT AATCGGTCTT GCTTTAGTAG AAAAATTTAT GAAAAATATA AATTATGATG TTTCAAATAT TTTAAATTCA TTACCTCTTG TGGTACTTAT ATTAGCAGTA ATATCAATAT TTATATTAAT TGTTTTTTAC AAGTTTTCCT TAAATAAATT TATAAGAAAA GAATTATAA
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Protein sequence | MKNLIIKDLK NIRVIFIFYI LTMTFGYSPF FIDLPKDRYD FLINSVFIYF TLLASMISVN FIIAKNTNKG AMTNKLLRSL PIDARSVVGT SFILPILIFL IFSLPNILVG MGVSFMLGEK IIVNPFNLLL TFIIFYIYAS ITFSMAIIYP ESSVVSYLRS VPLFILIIGL ALVEKFMKNI NYDVSNILNS LPLVVLILAV ISIFILIVFY KFSLNKFIRK EL
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