Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0372 |
Symbol | |
ID | 4202326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 449260 |
End bp | 450180 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638081256 |
Product | polysaccharide deacetylase family protein |
Protein accession | YP_694829 |
Protein GI | 110799482 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA TAAAACACAA AGGATTTCTA ATAGCTCTAG TTTCTGCACT AATTATAAGT TCATCTTTCA TTGCTTGTGA CATGAAAGGT AACAAAAGCA ATGTGGAAAG TGAAAAAGCT AATTTAGAAA ATAATACTCA AAAAGATGAA GCTTCTAGCA ATAAGGAAAA TCCTACAGAT AATACTAGTG AAAAATCAAA TTCCAATGCT GAAGCTACTA ATAATAGATT TGAAGGGTTA AAAACTACTT CTGAAGATAT GAATATTCCT GTTTTATGTT ACCATGATGT AACTCCAAAC AATCCAAATA ATAATGAACT TTTAGTAAAC CCTGAAAAAT TCAAAGAACA ACTTCAATAT TTAAAGGATA ATAATTATAC ACCTATAACT TTAGATGAAC TTTATGATTA TCTAAGAAAT AATAAACCTA TTCCTGAAAA ATCTGTTGTT ATAACTCTTG ATGATGGATA TAAAGGAAAC TATGAATATG CTTATCCTTT ACTAAAAGAA TTCAAATTTC CTGCTACAAT ATTTGTAATT TCAAATTATG TTGGAGCACA GGATTATATG ACTGCTGATC AATTAAAAGA AATGTCTAAT AACGGTATAG AAATAGAAAG CCATACTTTT AAACATGATG ACTTATCTAC ATTAGATGAA TCTAAACAAC TTGAAACTCT AAAAGATTCT AAAGTAGCTT TAGAAAAAAT CATTGGAAAA CCTGTAGATT TTGTTGCTTA TCCTTTTGGA AGATATAACT CTAGTACTAG AGTTGCAGCA GAAAAAGCTG GATATAAATT AGGTTTTAAT TTAAATGGAA ACTTTACTGA CAGAAAAGAC AATAATTTTA ACATGGATAG AATTTATGTT AGTAATAATG ATTCCTTACA AAAATTTGAA AGTAGATTAA CTGGTAGATA A
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Protein sequence | MRKIKHKGFL IALVSALIIS SSFIACDMKG NKSNVESEKA NLENNTQKDE ASSNKENPTD NTSEKSNSNA EATNNRFEGL KTTSEDMNIP VLCYHDVTPN NPNNNELLVN PEKFKEQLQY LKDNNYTPIT LDELYDYLRN NKPIPEKSVV ITLDDGYKGN YEYAYPLLKE FKFPATIFVI SNYVGAQDYM TADQLKEMSN NGIEIESHTF KHDDLSTLDE SKQLETLKDS KVALEKIIGK PVDFVAYPFG RYNSSTRVAA EKAGYKLGFN LNGNFTDRKD NNFNMDRIYV SNNDSLQKFE SRLTGR
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