Gene CPF_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0321 
Symbol 
ID4201636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp381297 
End bp382679 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content32% 
IMG OID638081208 
Productamino acid permease family protein 
Protein accessionYP_694781 
Protein GI110801135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0838341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTT TTAAAAAGCA AAGCTTAAAA AGAATACTTA GCGAAGCAAA TGAAAATAAG 
GAAAGAACCC TAAGTGCTTT GGATTTAACA CTAATGAGTG TTGGGTCAGT AATTGGTACT
GGAGTTATGG TTTTAACTGG GATTGTTGCA GCTAAACAGT CTGGGCCAGC TACCTCCATA
GCATTTATTG GAGGAGGAAT TGCGGCGGCT ATAATTGTTT TATGCTATGC AGAATTTAGT
TCAAGTATTC CAAGTGCTGG AGGGTCTTAT TCATTTACTT ATGTCTCCTT AGGTGAGATT
ATTGCATATA TATCAGGATT GTGCATTGTT ATTGGATATA CATTATCTAC AGCTACAGTA
GCATCGGGAT GGGGATCTTA TCTTTTAAGT CTTTTAGATA TTCTAGGAAT AAAATTACCA
AAGACATTTA CAGCTATTCC AAGTGAAGGG GGAATAGTAA ATCTACCAGC AATGATATCA
ATTTTATTTA TAGTTTTTGT AATATCTTTA GGTACTAAAG AAAGTAAGAA GGTTAATGAT
ATTATGGTAT TTATAAAGAT TGCAGTTATT GCTTTATTCA TAGGAGTTGG AGTTTTTCAT
GTAAATACTA GTAATTGGCA TCCATTTGCT CCCTTTGGAG TTAAGGGTAT AGTCACTGGA
ACAGCTTCTT TATTCTTTGC TTATTGTGGA TTTGATGCAA CGGCCTCAGC TGCTGAAGAG
GTTAAAAATC CACAAAAATC TTTACCATTA GGTCTTATAA GTTCTTTAGT AATATGCACA
ATTATATACA TAGCTGTCTC CTTAGTCTTA ACAGGAGTAA CCTCATATAC TAATTTAAAT
GTTGGTGATG CATTATCCTA TGCTTTAAAA TTAGTAGGGC AAAGGGGAGT TGCCTTTGTA
GTATCCTTAG GAACTGTAAT AGGAATCCTT GCCGTAATAT TTGCAGGTAA CTTTACAACA
TCACACATAC TTTTAGCCAT GAGTAGAGAT GGATTATTAC CAAAATTCTT TAGTAAAGTT
GATAAAAAAG ATGTGCCATA TACAGCATTA TGGACTGTTG GTATAATAGG TGCCTTATTA
GCAGGATTTT TTAATCTAGG ACAGTTAGCT AACTTTGCTA ATATAGCCTT TTTATTAACA
TATACTTTAG TTTGTATATC TTTAATAGCC TTTAGAAAAA AATATCCTCA TGTAAAAAGA
GGGTTTAAAA CTCCATTGGT ACCATTTATT CCTTTACTAG GGGCATTTAG TTGCTTATTT
TTAATGAGTA ATTTATCAGA AGAAATATGG AAAATATTTA TTGTGGTTTT AGTTTTATTA
ATCATAAGTT ACTTAGTTTA TGGAAGAAAG CATTCATTAA TCAATAAAAA CAATGATAAT
TAA
 
Protein sequence
MEIFKKQSLK RILSEANENK ERTLSALDLT LMSVGSVIGT GVMVLTGIVA AKQSGPATSI 
AFIGGGIAAA IIVLCYAEFS SSIPSAGGSY SFTYVSLGEI IAYISGLCIV IGYTLSTATV
ASGWGSYLLS LLDILGIKLP KTFTAIPSEG GIVNLPAMIS ILFIVFVISL GTKESKKVND
IMVFIKIAVI ALFIGVGVFH VNTSNWHPFA PFGVKGIVTG TASLFFAYCG FDATASAAEE
VKNPQKSLPL GLISSLVICT IIYIAVSLVL TGVTSYTNLN VGDALSYALK LVGQRGVAFV
VSLGTVIGIL AVIFAGNFTT SHILLAMSRD GLLPKFFSKV DKKDVPYTAL WTVGIIGALL
AGFFNLGQLA NFANIAFLLT YTLVCISLIA FRKKYPHVKR GFKTPLVPFI PLLGAFSCLF
LMSNLSEEIW KIFIVVLVLL IISYLVYGRK HSLINKNNDN