| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0310 |
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| Symbol | |
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| ID | 4203171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 368854 |
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| End bp | 370254 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081197 |
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| Product | putative glycolate oxidase, subunit GlcD |
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| Protein accession | YP_694770 |
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| Protein GI | 110799740 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATA ACAAAATAAA TGAAAGTGGA ATTGAATTTA TAAAAGGAAT AATAAATGAT
AATGAAAGAG TATTTATTGG AGAAGAAATA AGTGAAGATT ATTCTCATGA TGAGTTAGGT
TCAGAAAAGC ATATGCCTGA TATTGTTGTT AAGGCTATGA GTAGAGATGA AATTGTAGAA
ATAATGAAAT ATGCAAATAA TAATAATATT CCTGTGACAG TAAGAGGGGC TGGTACTGGA
CTTGTTGGAG CAGCAGTTCC AATACTAGGA GGAATTTTAT TAGATTTAAG TGGAATGAAT
AAAATATTAG AGTTAGATGA AGATAACTTA ACTCTTACAG TTGAGCCTGG AGTTCTTATT
ATGGAAATAG CTAAATTTGT TGAGGAACAT GATTTATTTT ATCCACCAGA TCCAGGAGAA
AAAACAGCAA CCATAGGTGG TAATGTTAGT ACAAATGCAG GAGGAATGAG AGCTGTTAAA
TATGGAGTAA CAAGGGATTA TGTAAGAGGA ATGGAAGTAG TTCTTCCTAG TGGAGAAGTC
TTAGAGCTTG GTGGAAAAGT TGTTAAAAAT AGTTCAGGAT ATAGCTTAAA AGATTTAATT
ATTGGATCAG AAGGAACATT AGGAATAATA ACAAAAATAG TATTAAAACT ATTACCACTT
CCAAAGAAGG TAATAAGCCT TTTAGTTCCA TTTAATGATT TAGAAAGTGC CATAGAAACA
GTGCCTAAAA TAATAAAATC TAAGAATATT CCTACAGCTA TAGAATTTAT GCAAAGAGAT
TTAATAATTT CAGCAGAGGA ATTCTTAGGA AAGAAATTTC CTGATAATTC ATCAAATGCT
TATTTAATAT TAAGCTTTGA TGGAAACTCA AAGGAAGAGG TTGAAGGATA TTATGAAAAA
GTAGCTGACA TATGTTTAAA AGAAGGAGCT TTAGATGTAT TTATATCAGA TACAGAAGAA
AGACAAGAAT CAATATGGTC AGCTAGGGGA GCTTTCTTAG AAGCCATAAA GGCATCAACA
AGTGATTTAG ATGAAGTTGA CGTTGTTGTA CCAAGAAATA AGGTAGCAGA GTTTGTAAAA
TTCACTAATG AAGTAGAGAA AAAACTTAAT GTTAGAATAA GAAGTTTTGG ACATGCTGGT
GATGGAAACT TACACATTTA TATATTAAAG GATGAATTAT CAGAGGATGA ATGGCATAAA
AAACTTAATG AAGCCATGGA AATACTTTAT AGAAAACAAA GAGAACTTAA TGGACAAGTT
TCAGGAGAAC ATGGAATAGG CTTAGCTAAG AGACTATATC TAAATGAATC CTTAAATAAG
GCCACAATGG ATATTATGAG AGGAATAAAA TTAGCCTTTG ATCCAAATAA TATTTTAAAT
CCAGGTAAGG TTTGTGAATA A
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| Protein sequence | MSYNKINESG IEFIKGIIND NERVFIGEEI SEDYSHDELG SEKHMPDIVV KAMSRDEIVE
IMKYANNNNI PVTVRGAGTG LVGAAVPILG GILLDLSGMN KILELDEDNL TLTVEPGVLI
MEIAKFVEEH DLFYPPDPGE KTATIGGNVS TNAGGMRAVK YGVTRDYVRG MEVVLPSGEV
LELGGKVVKN SSGYSLKDLI IGSEGTLGII TKIVLKLLPL PKKVISLLVP FNDLESAIET
VPKIIKSKNI PTAIEFMQRD LIISAEEFLG KKFPDNSSNA YLILSFDGNS KEEVEGYYEK
VADICLKEGA LDVFISDTEE RQESIWSARG AFLEAIKAST SDLDEVDVVV PRNKVAEFVK
FTNEVEKKLN VRIRSFGHAG DGNLHIYILK DELSEDEWHK KLNEAMEILY RKQRELNGQV
SGEHGIGLAK RLYLNESLNK ATMDIMRGIK LAFDPNNILN PGKVCE
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