Gene CPF_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0262 
Symbol 
ID4203592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp317140 
End bp317886 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content31% 
IMG OID638081149 
Productpeptidyl-prolyl cis-trans isomerase family protein 
Protein accessionYP_694723 
Protein GI110800910 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AAGTTCTAGC AACAGTTGGA AATACAGAAA TAACTTCAGA CTATATAGAT 
GAGATAATAG CAAGATACCC AGCTCAACAA CAAGCTATGC TTGCTAGTGA TGAAGGTAAA
AGACAAGTTT TAGAGCAAGC TATTGCTTTT GAATTAATGT CTGAATTTGC AAAAGAAACT
GGATTAGATA AGACTGAAGA GTTTAAAGAT CAATTAAATA AATTTGCTAA AGAATTATTA
GCTCAAATGG TAATGAAAAA GACTTTATCA TCAGTTACTG TAACAGATGA TGAAGCAAAA
GCTTTTTACG AAGAGCATAA AGAAAACTTC GTTGAATTAG AAACTGTAAC AGCTAAGCAC
ATCTTAGTTG CATCAGAAGA AGAAGCTAAA AAAGTAGAAG AAGAAATAGC TTCAGGTTCA
ATAACTTTTG AAGATGCTGC TAACAAATAC TCAAGCTGTC CTTCAAAGGA ACAAGGTGGT
AACTTAGGTT CATTCTCAAA AGGAATGATG GTTCCAGAAT TTGAAGAAGC TGCATTTAAC
TTAGAGTTAG GAGTAGTTAG TGCTCCAGTT AAAACTCAAT TTGGATATCA CTTAATAAAA
GTTGAAGACA AAACAGAAGC TAAAACTAAG GCTTTTGAAG ATGTTAAAGA GCAAGTTGTT
AATATGTTAA TTCAAGAAAG ACAACAAAAG AAATACTTAG AATTAATAAA AGAATTAAGA
GAAAAATATG GAGTTAAATT AGCTTAA
 
Protein sequence
MEKKVLATVG NTEITSDYID EIIARYPAQQ QAMLASDEGK RQVLEQAIAF ELMSEFAKET 
GLDKTEEFKD QLNKFAKELL AQMVMKKTLS SVTVTDDEAK AFYEEHKENF VELETVTAKH
ILVASEEEAK KVEEEIASGS ITFEDAANKY SSCPSKEQGG NLGSFSKGMM VPEFEEAAFN
LELGVVSAPV KTQFGYHLIK VEDKTEAKTK AFEDVKEQVV NMLIQERQQK KYLELIKELR
EKYGVKLA