Gene CPF_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0258 
Symbolung 
ID4200956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp306730 
End bp307407 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content29% 
IMG OID638081142 
Producturacil-DNA glycosylase 
Protein accessionYP_694720 
Protein GI110798755 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTG AATTTAATAA TGATTGGGAT GATTTATTAA AAGATGAGTT TGAAAAGGAA 
TATTACTTAA ATCTTAGAAA GTTTCTTATA AATGAATATA AAACTCAAAA AATACATCCA 
AGCATGTATG ATATATTTAA CGCATTAAAA TTCACACCTT ACAAAGATGT TAAAGTTGTT 
ATTTTAGGTC AAGATCCATA TCATGGACCA AACCAAGCTC ATGGATTTAG CTTTTCTGTT 
AAACCAGGAG TTCAAACTCC TCCATCTTTG AGAAACATGT TTAAAGAATT AAATTCTGAC 
CTTGGATGTT ATATACCTAA TAATGGATTT TTGGAATCTT GGGCTAAACA AGGTATCCTT 
TTATTAAATA CTGTTTTAAC AGTTAGAGAA GGGCAAGCAA ACTCTCACAA AGGTAAGGGT 
TGGGAAATAT TCACTGATAG AGTAATTGAA TTATTAAACA AAAGAGAGGA ACCTATAGTA 
TTTATTCTTT GGGGAAGAAA TGCTATTTCA AAAGAAGCTT TAATAACTAA TTCAATACAT 
AAAATAATAA AATCAGTGCA TCCAAGTCCC CTATCTGCTA CTCGTGGATT CTTTGGTTCA 
AAACCTTTCT CTAAAACTAA TGATTTTTTA GTTTCAATAA ATAAAGAGCC TATAGATTGG 
CAAATACCTA ATATATAA
 
Protein sequence
MAAEFNNDWD DLLKDEFEKE YYLNLRKFLI NEYKTQKIHP SMYDIFNALK FTPYKDVKVV 
ILGQDPYHGP NQAHGFSFSV KPGVQTPPSL RNMFKELNSD LGCYIPNNGF LESWAKQGIL 
LLNTVLTVRE GQANSHKGKG WEIFTDRVIE LLNKREEPIV FILWGRNAIS KEALITNSIH 
KIIKSVHPSP LSATRGFFGS KPFSKTNDFL VSINKEPIDW QIPNI