Gene CPF_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0223 
Symbol 
ID4203219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp273017 
End bp274036 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content30% 
IMG OID638081107 
Productputative iron compound ABC transporter, iron compound-binding protein 
Protein accessionYP_694686 
Protein GI110801336 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TTTTAAATAA AAAAATCACC ATAATATTAA CTATTATAAT TCTACTATTA 
ATAGCCAAAT TACATATTAT AAAAAAAGAA AAGGCTTTAA GTACATCTAA CATGAACCAT 
ATAGTTGTTT ATGGCTCTCT TAGAGAGGAA GAGGGTAAAT ATCTTCTTGA AAAATTTAAA 
AATAAATATG ATTGTACTTA TGAATATATA AAGCTTCCAA CGGAAGAAGC TGTGCAAAGA 
ATATTAGACA CCAGGGATAA TCCTCAAGGA GATATCTTTA TTGGGGGAAG CTGTGATGGA 
TATGAAATTT TGAAAAAGTA TGATGCCTTA GAAGAATATA ACTCTCCCTG GGCTAATAAT 
ATTCCTGCAA AATACAAGGA TTTAAGAGGA TATTGGACTG GTTTTCAAAT AACTCCACTA 
TCAATAGGAA TAAATAAATC TCTATGGCAA ACACATTTTG GAGGTTCTGT TCCCTACCCT 
AAGAAAATTG AGGACTTATT AAACCCAGAA TTTAAGGATA AAATAATACT TCCTAATCCT 
CAAACCTCTG GTACAGGATA TACCTTAATG GCATCACTTT ACCAGGAGCT AGGGAAAGAA 
AAGTTTGAAA CATTTATAGC TAAGCTTAAT GACAATGTAT CCTCTTCAAC CATAAGTGGA 
TTTAACTCAA TTCAAAGGGT TGCCTCTGGC GAATATCTTA TAACGGTTAA CTTTCTAAGT 
GACCAATTAA TAGCTAATAG ATCTTCAGAC AATATAATTA GCATAGTCCC TGAAAATGCT 
GGTTGGAATG TAGACTCTAT AGCTTTAATC AAAAATTCTA AACATGAAAA AATAGCTAAA 
AGCTTTATAG ACTTTGTATT ATCAAAGGAA ACCTCAAGTG ACTTATCAAA GTTCTCTAAG 
GCTATTTCTA CTAAGAACTT TGACACAAAT CAATTTAAAA TATATGATAA ATATAATTTC 
TATCTCGCTG CTGAAGATAG GGAAAAAATA ATGCAAATAC TCTATAAAAA TAAAGAGTAA
 
Protein sequence
MKKFLNKKIT IILTIIILLL IAKLHIIKKE KALSTSNMNH IVVYGSLREE EGKYLLEKFK 
NKYDCTYEYI KLPTEEAVQR ILDTRDNPQG DIFIGGSCDG YEILKKYDAL EEYNSPWANN 
IPAKYKDLRG YWTGFQITPL SIGINKSLWQ THFGGSVPYP KKIEDLLNPE FKDKIILPNP 
QTSGTGYTLM ASLYQELGKE KFETFIAKLN DNVSSSTISG FNSIQRVASG EYLITVNFLS 
DQLIANRSSD NIISIVPENA GWNVDSIALI KNSKHEKIAK SFIDFVLSKE TSSDLSKFSK 
AISTKNFDTN QFKIYDKYNF YLAAEDREKI MQILYKNKE