Gene CPF_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0152 
Symbol 
ID4203214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp179631 
End bp180182 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content32% 
IMG OID638081033 
Producthypothetical protein 
Protein accessionYP_694616 
Protein GI110799919 
COG category[S] Function unknown 
COG ID[COG3236] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02464] conserved hypothetical protein, ribA/ribD-fused 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0120146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATT CTATAGAAGG TGTTTGCGAG AAGTTTAAAA GTGGAGAGAA ACTAGAGTTT 
TTATTTTTCT GGGGACATAC AAAAAATAAA AATGAAAAAA TAACTAAGGC TTGTTTTAGC
CAATGGTACC TTTCTGATTT TACAGTTAAT GGAGTTTTAT ATAACTGTGC AGAGAAGTAT
ATGATGGCTG AAAAGGCAAG GTTATTTAAG GATTATGAAA CCTTAGAAGA AATATTATCT
GTTGAAAATC AAAAAGAAAT AAAAGACTTA GGAAGAAAGA TTAAAAACTT CAATGAAGAG
CTTTGGAATA GAGAAAAATA TGAAATTGTT AAGAGTGGAA ACTTAGCTAA GTTTTCTCAA
GATGAAAATC TTAAGGAGTT TTTATTAAGC ACAGGAGATA AAATAATAGT TGAAGCAAGT
CCATATGACT CTATTTGGGG AATAGGAATG GGTGCAAAGG ATGAGAATAT AGAAGACCCT
ACAGCTTGGA AGGGGGAAAA TCTCTTAGGT TTTGCTCTTA TGGAAGTAAG AGGCTTGCTA
AATGCAATGT AA
 
Protein sequence
MRYSIEGVCE KFKSGEKLEF LFFWGHTKNK NEKITKACFS QWYLSDFTVN GVLYNCAEKY 
MMAEKARLFK DYETLEEILS VENQKEIKDL GRKIKNFNEE LWNREKYEIV KSGNLAKFSQ
DENLKEFLLS TGDKIIVEAS PYDSIWGIGM GAKDENIEDP TAWKGENLLG FALMEVRGLL
NAM