Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0139 |
Symbol | |
ID | 4202270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 165074 |
End bp | 166159 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081020 |
Product | DNA-cytosine methyltransferase |
Protein accession | YP_694603 |
Protein GI | 110799020 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0270] Site-specific DNA methylase |
TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00921515 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA TAGCAATTTC ATTTTTTGCA GGCGCTGGTG GATTGGATAT AGGAATACAT GAAGCTGGGT TTGATGTAAA ATTGAGTGTA GAATTAGAAG AAAAATACTG TGTGACATTA AAACAAAATA ATCCTACATT TAATGTAGTA AATGGAGATA TTATGGATTA TTCAAAAGAA AAAATATATA GTGATGCAGG ATTAAATTAT AATGATGAGA TTGATTTAAT ATTTGGTGGT AGCCCATGTC AGAGTTTTAG TACAGCTGGT AAACGACAAG CTTTTTCGGA TGAAAGAGGA AAGGCTATGT TAAAATTCAT TGAATTAATT GAAGAGGTAA AACCAAAAGC ATTTTTATTA GAAAATGTAA AGGGGTTATT ATCAGCAACA TTAAAACATC GTCCTTTAAA TCAAAGGGGA AAAGATTTTC CGCCATTAGA TGAAGATGAG GAAAATGGAA GTGCATTAAG GTATTTATTA AATCAAGTCA AAGATTATAA CGTTGTATAT AAAGTGCTTA ATTCAGCTGA ATATGGAGTT GCTCAAAAAA GAGAGAGAGT AATTTTTGTT GGAATAAGAA AAGATTTAAA CAAAGTATAT GAATTTCCAA ATCCTACTCA TGGAGTAGGA AGAAAATATC CATTTGTTAC AGTTAATGAT GTAATACAAG AGTTAGGAGA TATAAAACAT AATTATGTTA AGTATTCAGA GGAAAGATTA AAATATATGA AGTTAATACC TAAAGGTGGA GGTAATTGGA GAGATTTAAA TGAGGATATA GTTGAAAAGG CTATGGGGGG AGCATATAAA TCAGGTGGAG GTAAAACAGG ATATTTTAGA AGAATAAAAG CTAATGAACC AAGTCCTACA TTACTGACAT CTCCAATACA AAAAAGTACA AATATAGGGC ATCCGTATGA AGATAGACCT TTAAGTATAG AGGAATATAT CGCTATCCAA GGATTTCCTA AAGGGTATAA AATAAATGGA ACAATTAATA ATAAATATAC TCAGATAGGA AATGCAGTTC CAGTAAAATT AGCAAAAGTA TTAGGTGAAA AATTAATAGA TATCTTATAT GAGTAG
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Protein sequence | MSKIAISFFA GAGGLDIGIH EAGFDVKLSV ELEEKYCVTL KQNNPTFNVV NGDIMDYSKE KIYSDAGLNY NDEIDLIFGG SPCQSFSTAG KRQAFSDERG KAMLKFIELI EEVKPKAFLL ENVKGLLSAT LKHRPLNQRG KDFPPLDEDE ENGSALRYLL NQVKDYNVVY KVLNSAEYGV AQKRERVIFV GIRKDLNKVY EFPNPTHGVG RKYPFVTVND VIQELGDIKH NYVKYSEERL KYMKLIPKGG GNWRDLNEDI VEKAMGGAYK SGGGKTGYFR RIKANEPSPT LLTSPIQKST NIGHPYEDRP LSIEEYIAIQ GFPKGYKING TINNKYTQIG NAVPVKLAKV LGEKLIDILY E
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