Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0112 |
Symbol | |
ID | 4202002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 132430 |
End bp | 133599 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 638080993 |
Product | hypothetical protein |
Protein accession | YP_694576 |
Protein GI | 110800644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00718309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTT GTACTAAATG TGGTAATAAA CTATCTGATT CAATGAAATT TTGCAATAAG TGTGGTGCTA AGGTAAAATC TGTAGATAAA GATACTAAAA ATAACTCAGA TACAGAAGAT ACAAAAGATA AAAAAGATAT TCCTAACTCT AAAAATAATA TTGATAAAAC CATAATCTTA GATGCACCTA AAATAAAAAA AGAAATTAAT ACTAATATTA ATGAAAATAT TAAGAATAAT TTCAAACCTC TTCATGATTC TAATTTTAAT AATAAAGAAG AATATTTAGA TGCAAGTTTT GATGATGATT TAGATGAAAA TTTCAATGAT GAATCTTATC ATAATGAAGA TATTGATAAT TTTAAACATT CTAATACCAA AAAAAAGATT TTAATAAGCA TTTTCACCTT AGTAGCTTTT GTAATAATAG GTACTTCTAT TTATTTTTTA AGATCACCTT TATTATATAA ATACTATTAT AACTCTGCAC TTAAATCTTC ATCAGTTACT GAAAAATTAT CTTATTATAA CAGTGCTTTA AAATACTCTA AAAATGATGA TTTATTAAAT TCTATTTATA CAACTTTAAA GTCTGACTCT GATTTTGTTG ATAATTCTTC AATATTAACA AACTTAAATA CATCTGAAAA AGATAATTTA ATGTCAAAAT TATATGTAAA TAAAGCTACT GTAGATTTTA AAAATAAAAA TTACACTGAC TGTGATTCTG ATTTAGATTT AGCTACAAAG TATGGATATA ACAAAGAAAA CTTTTCACAA TATGATGATT TACAAAAAAA GCTTAATGAA AGTAAAAATT CTTCAAGTAA TGATAAAGTT GATAACATAT ATAGTTTCAC AAATGAAAAC CCATCAAAAT TTTCTGGAAA CATATATGAT TATCCTTATG ACTTTATAAT GCCATACAGT AATTCTTCTT ATTTATCAGC ATCAGATCTT TCTAAATATA ATAAAAGTAC TCTTGCTTTA ATGAGAAATG AAATATACGC ACGTCATGGA TATGTATTTA ATACTAATCC ATTTAAGGCA TATTTTAATT CAAAATCATG GTATCATCCT GATTCATCCT TTAAAGGTGA TGACAGTGAA TTAAATGATT ATGAAGTAAA AAATGTTCAA ACTATAAAAT CAGTTGAAAA CTCCAAATAA
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Protein sequence | MKFCTKCGNK LSDSMKFCNK CGAKVKSVDK DTKNNSDTED TKDKKDIPNS KNNIDKTIIL DAPKIKKEIN TNINENIKNN FKPLHDSNFN NKEEYLDASF DDDLDENFND ESYHNEDIDN FKHSNTKKKI LISIFTLVAF VIIGTSIYFL RSPLLYKYYY NSALKSSSVT EKLSYYNSAL KYSKNDDLLN SIYTTLKSDS DFVDNSSILT NLNTSEKDNL MSKLYVNKAT VDFKNKNYTD CDSDLDLATK YGYNKENFSQ YDDLQKKLNE SKNSSSNDKV DNIYSFTNEN PSKFSGNIYD YPYDFIMPYS NSSYLSASDL SKYNKSTLAL MRNEIYARHG YVFNTNPFKA YFNSKSWYHP DSSFKGDDSE LNDYEVKNVQ TIKSVENSK
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