Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0069 |
Symbol | |
ID | 4203846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 77726 |
End bp | 78574 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638080947 |
Product | transcription antiterminator |
Protein accession | YP_694534 |
Protein GI | 110800004 |
COG category | [K] Transcription |
COG ID | [COG3711] Transcriptional antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA AAACGGAAAA AGCATATGAG GTAAAAAGAG CCTTCAACAA TAATATAGTT TTGGTTGATG ATGATGAAAA AGAAATTATA TTATTTGCTA AAGGTATAGG CTTTAATTGT AAAAAAGGTT CAATAATACC TGAGAATACT AATATAGAAA AAATATTTAC TATACAAGAT GAGAATAATA TTGCTAACTT TAGAAGAGTG GTTGGAAGTA ATGATGAGAA GTTTATTGCT TTTTGTGAAG AATTAATATT AGAGATTTCA AGAGATTTTA GTGAGGAATT AAACGAGATT ATACATATAG GTTTAATAGA TCATATTTCT TTTGCTATTG AGAGAATGAA AAAAGGAGAG ATTTTAAGAA ATCCTTTTTT AGTAGAAATA GAAACTCTAT ATCCTAAAGA GTTTGAGGCT GCAACTAAAA TGGTTAAAAA GCTTGAGGAT TTTACAGGGG TAAGTATAGT TGATGATGAG ATTGGATTTA TTGCTATGCA TATACATTCG GCAAGAACAA CAGGAAAGAT TTCTCATACA ATAAAATTTA CCTATATAGC AAATACTGCT GTAGAATATA TTGAAGATGC TTTTAATATT GAAGTAGATA GAACTTCATT ATCTTATGCT AGATTTATAA GTCACTTAAG ATTTGCTATT GAAAGACTTA TAAATAATAC TCCGGTAAAA AATGAATTAC TTTCTATTAT AAAACTAAAG TATCCAGAAT CCTTTAAGGT TGCTGAAGAA ATAGGAAAAG CTATAAATGA AGATTTTTCT CTAGAAGTTG CAGAAGATGA GATAGGGTAT TTAGCCTTGC ATGTAGAGAG AATAAGAAAA AATGAATAA
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Protein sequence | MIKKTEKAYE VKRAFNNNIV LVDDDEKEII LFAKGIGFNC KKGSIIPENT NIEKIFTIQD ENNIANFRRV VGSNDEKFIA FCEELILEIS RDFSEELNEI IHIGLIDHIS FAIERMKKGE ILRNPFLVEI ETLYPKEFEA ATKMVKKLED FTGVSIVDDE IGFIAMHIHS ARTTGKISHT IKFTYIANTA VEYIEDAFNI EVDRTSLSYA RFISHLRFAI ERLINNTPVK NELLSIIKLK YPESFKVAEE IGKAINEDFS LEVAEDEIGY LALHVERIRK NE
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