| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0065 |
|---|
| Symbol | |
|---|
| ID | 4203806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 69170 |
|---|
| End bp | 70336 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638080940 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_694531 |
|---|
| Protein GI | 110800426 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTA AAAAGCAAAA TTATGTTGCA TTAGCTTTTC TATTTATAAT GATGATTTTA
GCAGCTATAG TTGAAAATAC TAAGGGTATA TTCATACCAG TATTTAAACA GGAATTTGGA
GTTAACGATA ATACTATAAG TAACTTACTT ATTTCTACTT CAGCTGCTTA TATGGTATTA
ACATTTATAG GTGGAATGCT TTGCGAAAAG TTTGGACAGA AAAAGGTATT TTTAGCTGGA
TTGATGGTGA TATTTTTATC ACTTATATTT TTATCTTTTA CAAAAAACTA TTTAATGTTA
TATACAGGAA TGGTAATAAG TAGTGCTGGT ATAGCAATGG TTGCAATATC ATGTAATACA
GTTCTTCCTA TATTAGCATT AACGGCACAA AACGTAATAA TGAATGTTAT GCATGCTTGC
TACGGGTTAG GCTCTTCAGT TGGACAAGGA TTGTTTGGTT CATTAACTGC AAGAGGAGTT
AACTGGAGAA CTATGTATTT CTTTGTAGGT TTAGTTTACT TAGCAGTATT CATATGCTTT
ATATTCGTTA AAATACCTAG AACAGAAATA GTTAAAGAAA AAGATAAGAT GACTATAATA
GAAGCTTTAT CAAATAAGGT AATAGTTGCC TATATGCTTG CCTTAGGATT ATATGTATTT
ACAGAGCAGG GTATATCAAA TTGGTTCGTA AATTACATGA AGTACGGTTA TAATATAAAT
GAGCAAAAGG CAGGAATGTA TTTATCACTA TTTTTTGCTA TATTCACCAT AGGAAGATTA
TTTGGTGGAT TTGTAGTAGA AAAAAGAGGA TATTTCAATA TATTATATAA AACATTAATA
ATAGGAGCTG CACTTTGTAT CTTAGGTTTA CTTTTAGGTA GAAACGGTAT GGTGATAATA
TCTGTATCAG GATTATTCTT CTCAATAACA TTCCCAACTA CAGTTTTAAC TATTAGTAAG
GTTTTTGATA AGAATGTTGC ATATATTACA GGTATTGTAA TAACATCAGC TAGTTTAGTT
GGTATGATTC TTAACAAGGC TATTGGATTG TTAAATGAAA GTGTTGGACC AGATAAGGCA
TTTTATATTA TACCTGCAAG TGCAATTTTA TCTGCCATTT TAATGTTCTA CTTATACTTA
AATACTAAGA AGAGGCTAGT AAAGTAA
|
|---|
| Protein sequence | MNSKKQNYVA LAFLFIMMIL AAIVENTKGI FIPVFKQEFG VNDNTISNLL ISTSAAYMVL
TFIGGMLCEK FGQKKVFLAG LMVIFLSLIF LSFTKNYLML YTGMVISSAG IAMVAISCNT
VLPILALTAQ NVIMNVMHAC YGLGSSVGQG LFGSLTARGV NWRTMYFFVG LVYLAVFICF
IFVKIPRTEI VKEKDKMTII EALSNKVIVA YMLALGLYVF TEQGISNWFV NYMKYGYNIN
EQKAGMYLSL FFAIFTIGRL FGGFVVEKRG YFNILYKTLI IGAALCILGL LLGRNGMVII
SVSGLFFSIT FPTTVLTISK VFDKNVAYIT GIVITSASLV GMILNKAIGL LNESVGPDKA
FYIIPASAIL SAILMFYLYL NTKKRLVK
|
|---|
| |