| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0033 |
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| Symbol | psd |
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| ID | 4201686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 41086 |
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| End bp | 41970 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638080908 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_694501 |
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| Protein GI | 110798633 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.484885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAA TTTATAACAG GAAAACAAAA GCTTATGATG TTGAGCAAGT AGCTGGTCTT
AAATATATAA ATTGGTCTTA TGCATCTCCT ATAGGAAAAA GCTTCTTAGA ATTATTTATT
AAAAAGAAGA TGTTCTCAAA ACTTTACGGA AATTTTTGCG ATTCTTCTTT AAGTAAGAAA
AAAATTAAAG CCTTTATTGA TGAGTTTAAT ATTGATATGT CTCTTTGCAA TAAAAATATA
GATGAATTTG AAAACTTTAA TGATTTCTTT GCAAGGACCT TAACTCCTGA AGCTAGACCT
ATTGATTATA GTGAGAATAT TTTAATTTCT CCTGGAGATG GCAGATTATC TGCATTTGAA
AATATAGATC TTAATAAAGT TGTTCAGATA AAAGGATATA CATATTCTTT AAAAGAATTA
ATAGATGATC CTAAAGTAGC TGAAGAATTT GAAGGTGGAA CTTGTCTTAT ACTAAGATTA
TGCCCAACTG ACTATCATAG ATTTCACTTC GTAGATAGTG GAACTTGTAG TGAAAGCAAG
AAAATTTCAG GTTTTTATTA TTCAGTTAAT CCTATAGCTC TTAATAATGT ATCTGAACTT
TTCTGCAAGA ACAAAAGAGA ATGGTCTATT TTTAACTCTG ATAATTTTGG TAAAATTCTT
CATGTAGAAG TTGGTGCTAC TTGTGTTGGT ACAATACTTC AAACATATTC TCCTGAAAAG
AGAGTAAAAA AAGGAGAGGA AAAAGGATAC TTTAAATTTG GTGGTTCAAC TACTATCTTA
TTCTTTAAGA AAGATACTAT AAAAATAGAT AGTGATATAG TTGAACAAAC TAAATTAGGT
TTTGAAACTA AAGTTAATAT GGGTGAAACT ATTGGTAATA AATAG
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| Protein sequence | MIKIYNRKTK AYDVEQVAGL KYINWSYASP IGKSFLELFI KKKMFSKLYG NFCDSSLSKK
KIKAFIDEFN IDMSLCNKNI DEFENFNDFF ARTLTPEARP IDYSENILIS PGDGRLSAFE
NIDLNKVVQI KGYTYSLKEL IDDPKVAEEF EGGTCLILRL CPTDYHRFHF VDSGTCSESK
KISGFYYSVN PIALNNVSEL FCKNKREWSI FNSDNFGKIL HVEVGATCVG TILQTYSPEK
RVKKGEEKGY FKFGGSTTIL FFKKDTIKID SDIVEQTKLG FETKVNMGET IGNK
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