Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0030 |
Symbol | |
ID | 4203321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 38520 |
End bp | 39395 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638080905 |
Product | degV family protein |
Protein accession | YP_694499 |
Protein GI | 110801244 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT TTGTTATATT TACTGATTCG GCAGCTGATC TGCCAAAAAG CATGGTAAAA GATTTAGATA TTAATTATTT AGGACTTATA TGTAATATTA ATAATACAGA ATATATTGAT AATATTGATA GCGAATTAAC TCCAAAAGCT TTCTATAATA AATTAAGAGA AGGTATCATG CCATCAACAA GCCAAGTAAA CTCATTTAGA TTTGTTGAAG CCTTTGAAGA ATATGTTAAA CAAGGGATCT CTATTTTATA CTTAGCATTT TCATCAGCCT TAAGTGGAAC ATATAATAGT TCACTTATAG CTAGAGAGGA ATTATTAGAA AAATATCCTG ATGCTGATAT AAAGATAGTA GATACTAGAG CTGCATGCCT AGGTCAAGGA TTACTAGTTT ATTATGCTGC TCAAATGAAA AAGGATGGAA AATCTATAGA TGAAATCTAC TCTTGGGTAG AAGAAAACAA AAATAAGTTA TGTCATTACT TTACAGTAGA TAGCTTAGAT CATCTAAAAA GAGGGGGAAG AATTTCATCT ACAGCAGCAG CTATTGGTAG CTTATTAAGT ATAAAGCCAA TGCTATATGT AAATGATGCA GGTGAACTTC ATAACTTTGC TAAGGCTAAG GGAAGAAAAA AATCTTTAAA AATGTTATTC CAAGAGCTTG AAAAGCGTAT TGTAAACCCT AATGAACAAA CAATTTTTAT TGCTCATAGT GATTGTATTG AAGATGCAGA GACTTTAGCA GAAATGATTA GAGAAAAATA TACTGTAAAA GACATAATTA TAGATTATAT AGGAATAGTT ATAGGTTCTC ACACAGGTAT AGGAACATTA GCTGTCTTCT TTTTAGGGGA TACAAAAGAA CCTTAA
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Protein sequence | MKKFVIFTDS AADLPKSMVK DLDINYLGLI CNINNTEYID NIDSELTPKA FYNKLREGIM PSTSQVNSFR FVEAFEEYVK QGISILYLAF SSALSGTYNS SLIAREELLE KYPDADIKIV DTRAACLGQG LLVYYAAQMK KDGKSIDEIY SWVEENKNKL CHYFTVDSLD HLKRGGRISS TAAAIGSLLS IKPMLYVNDA GELHNFAKAK GRKKSLKMLF QELEKRIVNP NEQTIFIAHS DCIEDAETLA EMIREKYTVK DIIIDYIGIV IGSHTGIGTL AVFFLGDTKE P
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