| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1789 |
|---|
| Symbol | |
|---|
| ID | 5793165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii RSA 331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010117 |
|---|
| Strand | - |
|---|
| Start bp | 1633447 |
|---|
| End bp | 1633992 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641331145 |
|---|
| Product | opacity family porin protein |
|---|
| Protein accession | YP_001597432 |
|---|
| Protein GI | 161830942 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC TCATCACGTT AATTTTAGTC AGTTTAGCCA TTCCCCCAAT TTACGCGGGC
GGTGCCGTTG ATACCCCTTT TCTTAATTCT GGCCCTTACG TTGGGCTTCA CGGCGGTGTT
GCTTTACCAT CGGGGAGCGA TTTGAATGCA GGCCCCGTGG TGGGTGCGCA GGTGGGTTAT
CGGATGGGTA ATGTGCGTAT TGAAGGAGCC TTGAGTTATT ACAGCAATAG TTTGGAAGCG
AATAGCGACG CAAAGCTTCG TATGACGACG CTGATGGCCA ACGGCTATTA CGATTTCAAT
TTTAATGCGC CATTGGTACC TTTCGTTGGC GTCGGTGTTG GTTGGGTACA CGCTTGGCGA
ACGAATAACG GCGTTCTTTT GAATCGAGGC CCTGATAATA ATGAATTTGC CTATCAGGGA
ATCGCGGGAG TGAGCTTCAG AGTCAGTCCA CGCGTTACTT TGGGCGTCGA TTATCGCTAT
TTGGGTTGGA CGGATGGGAA TGGTAGTCAA AATTTAATCG AAATGAGCGT TAATTATCAG
TTTTAA
|
|---|
| Protein sequence | MKRLITLILV SLAIPPIYAG GAVDTPFLNS GPYVGLHGGV ALPSGSDLNA GPVVGAQVGY
RMGNVRIEGA LSYYSNSLEA NSDAKLRMTT LMANGYYDFN FNAPLVPFVG VGVGWVHAWR
TNNGVLLNRG PDNNEFAYQG IAGVSFRVSP RVTLGVDYRY LGWTDGNGSQ NLIEMSVNYQ
F
|
|---|
| |