Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A1561 |
Symbol | sdhA |
ID | 5794796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | - |
Start bp | 1432500 |
End bp | 1434263 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641330950 |
Product | succinate dehydrogenase, flavoprotein subunit |
Protein accession | YP_001597242 |
Protein GI | 161830054 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCTA TTAGAGTCAA ACAATACGAT GCTCTCATCG TAGGAGCGGG CGGGGCGGGC CTACGCGCCG CATTGGAAAT GGCGCAATCT CGTCAGTATA AAGTCGCCGT TGTATCAAAA GTTTTCCCCA CGCGATCGCA CACCGTTTCC GCGCAAGGTG GCATAGCGGC CGCTTTGGGC AATGTGGTGC CGGATAAACC GATTTGGCAT ATGTTCGATA CGGTTAAAGG ATCGGACTAC TTAGGCGATC AAGACGCCAT TCAATACATG TGTGAACAGG CCCCGCCTTC CGTGTACGAA TTGGAACATT ACGGACTTCC CTTTTCGCGA TTGGATGACG GTCGCATCTA TCAACGCGCT TTTGGCGGCC ACACGCGCGA TTTCGGTAAA GAAATGGCTC GGCGCACATG CGCCTGTGCA GACCGAACCG GTCATGCCAT GCTCCATACG TTGTACCAAA AAAATGTAGA AGCAGGTACC CATTTTTATT ATGAATGGTA TGGAATCGAT TTAGTTCGCG GTGCACAAGG CGGGATTGCC GGCATGATCG CAATGAATAT GGAAACCAGT GAGTTGGTTT TTTTCAAATC ACGAGCGACG ATTTTCGCCA CCGGGGGAGC GGGCCGTATT TATGAAACAA CCAGTAACGC TTATACCAAC ACAGGTGATG GGATTGGTAT GGTGTTGCGA GCTGGGTTAC CCGTGCAAGA CATGGAGTTT TGGCAATTCC ATCCGACGGG TATTTACGGT GTGGGTTGTT TGATTACAGA AGGCGCGCGT GGTGAGGGCG GTTATCTTAT TAATAAAGAC GGTGAACGTT TTATGGAACG TTATTCTCCG CATTTAAAAG ACCTCGATTG CCGCGACGTC GTTGCCCGTT CTATCTTACA AGAAGTCATG GCCGGCGGTG GCGTTGGCCC GAAAAAAGAT CACGTCTTAC TTAAATTGGA TCATTTGGGA GAAAAAGTAT TACGAGAGCG GCTCCCTGGT ATCATCGAAT TATCCGAAAA ATTTGCAAAC GTCGATATCA CAAAAGAACC CATCCCTATT TTACCGACCT GCCATTACAT GATGGGTGGC ATTCCCACCA ATATTCATGG TCAGGCGCTC ACGGTGGATG AAAATGGTAA GGATCAAATT ATCGAAGGCC TGTTTGCCGC GGGAGAATGC GCGTGTGTTT CTGTTCATGG GGCAAATCGG TTAGGGACTA ATTCATTATT AGACTTAGTC GTCTTTGGTC GTGCCATTGG GTTGCATTTG GAAGAGGCCT TAAAAACCGA ATTGAAACAT CGTTCTGAAA ATCCCGATGA TATTGATGCT GCCATCGCTC GCCTAAAACG CTGGGAAAAA CCCAATAACG TTGAAAATCC CGCATTACTT CGACAGGAAA TGCGAAAAGC TATGTCGGAA GACTTCGGCG TGTTCCGCGA AGAGCAGAAA ATGAAGCAGG GGCTGGAACG TCTGCAAAAA TTGAATGAAC GGTTACAGCG CGCGAAATTA ACCGATACCA GTCGCACTTT CAACAATGCC CGAATTGAGG CCTTAGAACT CGATAATTTA ATGGAAGTCT CTTACGCTAC CGCCGTTTCA GCGCAGCAGC GTACGGAAAG CCGAGGCGCT CATTCCCGTT ATGATTATAA AGAACGCGAC GATGCAAATT GGCTGAAACA CACCGTTTAT TTTCGCGACG GGCACATCGC TTACCGCCCT GTCAATATGA AACCCAAAGG GATGGACCCG TTTCCCCCTA AATCGAGAGA TTGA
|
Protein sequence | MSSIRVKQYD ALIVGAGGAG LRAALEMAQS RQYKVAVVSK VFPTRSHTVS AQGGIAAALG NVVPDKPIWH MFDTVKGSDY LGDQDAIQYM CEQAPPSVYE LEHYGLPFSR LDDGRIYQRA FGGHTRDFGK EMARRTCACA DRTGHAMLHT LYQKNVEAGT HFYYEWYGID LVRGAQGGIA GMIAMNMETS ELVFFKSRAT IFATGGAGRI YETTSNAYTN TGDGIGMVLR AGLPVQDMEF WQFHPTGIYG VGCLITEGAR GEGGYLINKD GERFMERYSP HLKDLDCRDV VARSILQEVM AGGGVGPKKD HVLLKLDHLG EKVLRERLPG IIELSEKFAN VDITKEPIPI LPTCHYMMGG IPTNIHGQAL TVDENGKDQI IEGLFAAGEC ACVSVHGANR LGTNSLLDLV VFGRAIGLHL EEALKTELKH RSENPDDIDA AIARLKRWEK PNNVENPALL RQEMRKAMSE DFGVFREEQK MKQGLERLQK LNERLQRAKL TDTSRTFNNA RIEALELDNL MEVSYATAVS AQQRTESRGA HSRYDYKERD DANWLKHTVY FRDGHIAYRP VNMKPKGMDP FPPKSRD
|
| |