Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A1094 |
Symbol | msbA |
ID | 5793647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | - |
Start bp | 967181 |
End bp | 968947 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641330548 |
Product | lipid A export permease/ATP-binding protein MsbA |
Protein accession | YP_001596850 |
Protein GI | 161830517 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TGACGCAGGG TATTCGCACC TACGGACGTT TGCTTCAAGC GACTAAACAA TATTGGCCTA TTTTTCTTAT TGGCGTCGTC GGCATGATTG CCGTCTCTCT CAGCGATGCG GGATTCACCT GGCTCATTAA ACCGATCATT AACCGAGGGT TTATTGCACG CGATTTAGTA TTCATTCGTT GGCTCCCCTT TATTATCGTT TTGGTCTTCT TATTTCGCGG TGCGGCTAAT TTCCTATCGA CTTATTTCAT TAATCGAGTG GCGCGTAATA TCGTCATGGA TTTTCGCCGC GCTATTTTTA GTCATTTATT GCGCTTACCC GCTGAATTTT ACGATCGTCA TAGTTCCGGC CATCTGTTAT CGACTGTTAT TTATAACGTT GAACAAGTCG CGCAAGCAAG TTCCGACGCT TTAATTATCA CCTTGCAAGC TTCATCATTG GTGGTGGGTT TATTGGTCGT CATGTTTTTG GTGAGTTGGA AGTTAACGCT GTTTTTCTTA GTGATCACCC CATTAATCGC GTGGGTGATG AGAGTTTGCA GCGCCAGATT ACGTCACCTC AGTACAAGCG TACAAAAGTC AGTGGGAGAA GTCACTCATA TTGCGAGTGA AGTTATCGAA GCTTATAAAA TCGTCCGCCT TTATGGCGGA CAAAAATATG AAAACGAAAA ATTTCGCCAC GCCACGAAGT TAAATCAGCA ACGTGAGTTA AAAGTCGTGG TGACCAATAG TGTAGGCACC TCCTTAGTGC AATTATTAAT TGCGATTCCA ATTGCTATCG TTCTGTTTTT TGCCACTCAG CCTTCGTTTC ATGTAACCGC GGGCAGTTTT GCATCGATCG TTTCGGCAAT GATTATGATG CTGCGCCCGG TACGGCGATT AACAATGGTT AACAGTTATA TTCAAAAAGG AATTGCTGCT GCTGAGAGTA TTTTTAAGTT ACTGGACGAA GATGTCGAAA AGGACAGGGG GGAGCGCCAT TTAGTGAGGG CAAGGGGAGC AATTGAATAT CAGGGGGTTT CTTTTGCTTA CGATAATTCT AAAAAAACTA TTTTAAGTGA GATCAGTTTT TCTATCGAGC CCGGGCAAAT GGTAGCCATT GTAGGTCGAT CTGGGGCGGG GAAATCCACT TTAATTAATT TATTGCCGCG TTTTTATGAT GCCTCGACCG GCGTCATAAA GATCGATGAC ATTAATATTA AAGAGTTTCG GTTACAAGAA TTACGTAACC AATTCGGTTT GGTGTCGCAA CACACCACGC TATTTAACGA CACCATTTTG AATAACATCG CTTACGGTCA AGCGGGCAGT ATTGATAAAA GAAAAATTAT CGAAGCCGCC CGGGCGGCAC ATGCGATGGA ATTTATCGAG CAATTACCGG AAGGATTAGA CACGGTTATT GGAGAAAACG GCGTGCGCCT TTCAGGAGGG CAGCGACAGC GTATTGCGAT CGCCCGCGCT TTATTTAAAA ACGCTCCCAT TCATATTTTG GACGAAGCGA CTTCGTCGTT GGATACGCAC TCTGAGCGAC ACATTCAGGC AGCGCTTGAT AATTTAATGG ATCAATGCAC TACATTGGTC ATTGCACACC GGTTGTCAAC CATTGAAAGA GCGGATTGGA TTATGGTGTT AGAAGAAGGA CGATTAATAG AGAAAGGAAC CCATCAGCAA TTACTCACTT TAAACGGCGC TTACGCGGAA TTATACCGCA TGCAATTTGC TGAAAAGCCG GCGGCTATGA CGGCCCTGGA TGAATAA
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Protein sequence | MKTLTQGIRT YGRLLQATKQ YWPIFLIGVV GMIAVSLSDA GFTWLIKPII NRGFIARDLV FIRWLPFIIV LVFLFRGAAN FLSTYFINRV ARNIVMDFRR AIFSHLLRLP AEFYDRHSSG HLLSTVIYNV EQVAQASSDA LIITLQASSL VVGLLVVMFL VSWKLTLFFL VITPLIAWVM RVCSARLRHL STSVQKSVGE VTHIASEVIE AYKIVRLYGG QKYENEKFRH ATKLNQQREL KVVVTNSVGT SLVQLLIAIP IAIVLFFATQ PSFHVTAGSF ASIVSAMIMM LRPVRRLTMV NSYIQKGIAA AESIFKLLDE DVEKDRGERH LVRARGAIEY QGVSFAYDNS KKTILSEISF SIEPGQMVAI VGRSGAGKST LINLLPRFYD ASTGVIKIDD INIKEFRLQE LRNQFGLVSQ HTTLFNDTIL NNIAYGQAGS IDKRKIIEAA RAAHAMEFIE QLPEGLDTVI GENGVRLSGG QRQRIAIARA LFKNAPIHIL DEATSSLDTH SERHIQAALD NLMDQCTTLV IAHRLSTIER ADWIMVLEEG RLIEKGTHQQ LLTLNGAYAE LYRMQFAEKP AAMTALDE
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