Gene CNN00530 details

Gene Information

• Locus tag: CNN00530
• ID: 3255388
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006683
• Strand: -
• Start bp: 178743
• End bp: 182128
• Gene Length: 3386 bp
• Protein Length: 1037 aa
• GC content: 52%
• IMG OID: 638254469
• Product: GTPase activator, putative
• Protein accession: XP_568586
• Protein GI: 58262352
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGAACATGAG AGGTCTATAA TCCCTACCAT AGCCCACCTC GCTATCTTCT CACAGCACAC 
CGACACCGAC AAAGATATCA ACGACAATTC ATGACGAACA ACTCGACGCA CTGACCATCG 
AAGCCCGTAA CCATGTCCCC TGTACCGCCG CCTCCGGCAG GCACTTTGGT CCCTTCAGAC 
GACTGGACAG ATGACCCATC ATTTGATTTC AACACTAATG CGTCCAATTT TATGCTCCCC 
TTCTCTCCCT CACCATCGTC ATCCTCCTCC CACCGCTCAT CGCTTTCGCA ATCCCTCACT 
TCCTCCCCGT TACGCCAGGT CCACACATCA GGCAAGGCTG GTGGACTAAA GAAACCTGAA 
GAGGAAGTTG ACTCATTAGA CGACGACTTT GATTTGCCTG CAGGTGATTT ACCTCCCCTG 
CCCTCGCCAC GGAACAAGCC ACATCGACCA AGATCCAGTG CCGCTTCTTC ATCTTCGTCA 
AGCAGCCATA TTACTCGGAC AGTTGTAGGT GCCGGTCCCA AAGGCGTAGG AACGATTACA 
AAACTCGGAG GGGAAGGAGG ATCGCCATCT GTTCCGAGCA GCGGGATATT AGCAGGAACA 
GTGAATGCAC GAGCAAGAGC ATTAGAACAG TCTTGGGAGG CGGATGTTGG TCTGGACGAC 
TTCGAAAAAG CGTTTGGAGA AGAGGAGGAT AGAAGTGCAA CTCTCAAACT GAAAGGAGGT 
CTACACGACT TAGGGGGGAA GAGGTTGTCT TCATCGAGGA AAGAGTTTGC AGGAGCCGAT 
GCGTTGGATG ATTTCATGGA TTTGGATGAC GAGGACCAGG CTACATTGAA GGCAGGGGCG 
ACCATCAAAG CATTGCTTCC TCCCCCAAGA AATAGAAAAC CAGCCGCCAC GCCATCGCAT 
GAATCAGCCA CTTTGGAAGA CGAGCTCGAA GCAGACTTTG CGTTGCCACT CAATTTAACG 
AATCTTACTC TTGCTACGCA ACCTGCATCC CGTCCCCGGC GCACGGGTCC TCGAGACTCC 
ATCGCTTCAA CCGTGAACAG CGAATCTTGG GGCTCACCCA GTACGTCTGC AAGTGGGAAA 
AAATATGGGT GGGGGTCAGA GGATTCGCCG TCTGGAAAGA GATTTAGTGA AACGAGTGCG 
ACAAGTGTTA GCGATGGCTT CGCTGAGAAT TACGGCATGG AAAAGGACGA GCTGAATGCG 
GAAGAGGATT TGGAGGATGG ATTAGAGTTT GAACCGACGT TCTTCTCCGC TAGCAGAACG 
AAGGAGCTCA ACTCTATTCT CGACCGCAAG CGAAGGCCTG AATATGCTCC CGCCCCTTCT 
CCTCCCGGCG ACATCAAAAG AGCCGCAGAC GATTCGTTTG AAGATGGCCT TGTTCTAGAT 
GATCCAGGCA TTGAACTCTC GCGTCACCGA TTGCGCGCTC AAAAGAGAGC ACGGGATCGT 
AATCCTCCTC TGACACTGCG CAAAGGGCAA CCTCAAAAGA GCGTGGTCAA AGAAAGGGAG 
AAAGCTTGGG AAAAACAACG TGAGCAGGGG TGGGGAAGAA ATACACCTGT TCCACCACCA 
CATGGCTCAA TCAGGGAAAG AACACAGAGC GGTCTAGGAG GCTTGGGGGC CTTAGGACTG 
GCACTGAGAA GTCATTCAAT TTCTACGGTC GTTCGAGATT CTTCTCGTCC TAGCGATGTT 
GGAGTGAGTG GAAGGGAGAA AGAAGCCATG CGTTCTCGGA GCGGTCACCT ACTCAACATG 
GGACCTCCAC CTGTCCCTGC CTCTTCGACT CCTTCTCAGC CACCCACGCC TTCTGCGTCT 
CGACTGCGTC ACCAAAAATC CCATTTCCAT CTTGCCGCCC CACCGCAATC ACCTTCATTG 
ACCCGAAAAC AGTCATTGGC AAGCTTGCAA GATGCGATAG CTCAGAGTGG GTCAGTATCA 
AGCATGGGAT CACATTTTGA GCAGTTTGGC TTGCCTCCAA TGCCAAGCTT GAATCACGCC 
AGTCTTGGTG CAAAGGATAG GGATCGGTAC CACAGTTCGA CTTCAAGATT GACCATGCCG 
ACCTCTAGCT CTCGTGCAAA GATCCGACCT CCTGTCTCAT CAATCTTCCC TAAGGCAGAC 
TTGCTTACAT CGACCACGCT CACCACTAGT TCAATCCCCC ACCCTTTTCC ACCACATTCA 
ACCATGTCTC TGAGAAATCG CATGCACTCC ACTCCTACAT CTAGTCCCTC AACCTCATCT 
TCACCCACAT ACGCCATGAC GATGAATATG AGCTCCTCGC GGAGGAAACT CTATGGAGAT 
GGGTCGGAGT TGGATGGTAT TGATGATCTT AGGGTTGATG AGGATTTAAG CAGTTGGACG 
ATAGGTAAGG GGCAGGGAGG TGGGAGTGTA AGAAATATGG CGGGATTGGG ACTGGGCAAA 
CCTTCTAAGA GAGGTGAGTT CATCTAAATT GGAAAGATGA AAAGAGCGCT GATTCGTCTT 
GTAGAGCACG AACATCTCTT ACATAGCCAT GGCCATACTC AAGGATATTT GCAGACTCAG 
GCAACCGGGC AAAAAGATAA GCCTCAGGAG GAGAAGAGAA AGAAGTCTGG TGGAACGCAG 
CTAGCTACGA GAAAGATCAG AAGGAAGGGA GCCGGGTTGA TCAAGCATCT TGGCGGAGCA 
GATAAAAAAA AGGGTGAGTA GCATTTATGA TTGGTAAAGT TTTTGCGTGA GAACAGGCTG 
ACGAGAATGA TTAGTGGTCG GAGAAATGAC ATGGAATCCC ACTACATTAC GTTGGGAAGG 
CAACGAGTCT ATTCTTCGTG ACTTTGACAC CATTTCTTCC ACCCGTCCCG CACTCATCAC 
CCACTATACC GGCTCTTCCG TCGGTGCAGG CGTCTCGTCA CCCATAGCAT CAACGTCTGC 
GGCCGTTGCA CCTCGAATAG TCGGTGATAT GCAGTTTGAC CCCATCCATA TGAAGTGGGT 
CAGCATCCTC CCATCTGACG AAGACGAGCC AGATCCATTT GAGGGGATGG CGGACGACGA 
AGATGAAGAG GCTGGTGGGG GCACGATACG AGCTGGCGCC GGTCGGCGTT TCGTGCCTAT 
CGGTCCTGGC TCGGGCTCTG TCGCCTCGAG CTCAACATGG TCGCAGCGCC TGACGAGTGA 
ATCATCCATG TCTATTGCTG CTAGTTCTGC TTCATGGGAA GATAGGACCC GACCGTCTGT 
CGGTGTCGAG ATATCGCCGG AGCTATGGGC AGAGTGCAAA GAAGCGGAAG AGCGGCATAG 
GAAGGAAATG AGAGGGTGGA TCATGCGACC GCCAAATGGA AGTAGCGAAA TAAGAGAGAG 
GCAGAGGAGA GAAGAGAAAA GGTTATGGGA GATTAGAAAT TTGGCAATGA GGAGTTGAAG 
ATAGGGACAT CTAATATTTG CTCAGG 

 

Protein sequence

MSPVPPPPAG TLVPSDDWTD DPSFDFNTNA SNFMLPFSPS PSSSSSHRSS LSQSLTSSPL 
RQVHTSGKAG GLKKPEEEVD SLDDDFDLPA GDLPPLPSPR NKPHRPRSSA ASSSSSSSHI 
TRTVVGAGPK GVGTITKLGG EGGSPSVPSS GILAGTVNAR ARALEQSWEA DVGLDDFEKA 
FGEEEDRSAT LKLKGGLHDL GGKRLSSSRK EFAGADALDD FMDLDDEDQA TLKAGATIKA 
LLPPPRNRKP AATPSHESAT LEDELEADFA LPLNLTNLTL ATQPASRPRR TGPRDSIAST 
VNSESWGSPS TSASGKKYGW GSEDSPSGKR FSETSATSVS DGFAENYGME KDELNAEEDL 
EDGLEFEPTF FSASRTKELN SILDRKRRPE YAPAPSPPGD IKRAADDSFE DGLVLDDPGI 
ELSRHRLRAQ KRARDRNPPL TLRKGQPQKS VVKEREKAWE KQREQGWGRN TPVPPPHGSI 
RERTQSGLGG LGALGLALRS HSISTVVRDS SRPSDVGVSG REKEAMRSRS GHLLNMGPPP 
VPASSTPSQP PTPSASRLRH QKSHFHLAAP PQSPSLTRKQ SLASLQDAIA QSGSVSSMGS 
HFEQFGLPPM PSLNHASLGA KDRDRYHSST SRLTMPTSSS RAKIRPPVSS IFPKADLLTS 
TTLTTSSIPH PFPPHSTMSL RNRMHSTPTS SPSTSSSPTY AMTMNMSSSR RKLYGDGSEL 
DGIDDLRVDE DLSSWTIGKG QGGGSVRNMA GLGLGKPSKR EHEHLLHSHG HTQGYLQTQA 
TGQKDKPQEE KRKKSGGTQL ATRKIRRKGA GLIKHLGGAD KKKVVGEMTW NPTTLRWEGN 
ESILRDFDTI SSTRPALITH YTGSSVGAGV SSPIASTSAA VAPRIVGDMQ FDPIHMKWVS 
ILPSDEDEPD PFEGMADDED EEAGGGTIRA GAGRRFVPIG PGSGSVASSS TWSQRLTSES 
SMSIAASSAS WEDRTRPSVG VEISPELWAE CKEAEERHRK EMRGWIMRPP NGSSEIRERQ 
RREEKRLWEI RNLAMRS