| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01250 |
|---|
| Symbol | |
|---|
| ID | 3255053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | - |
|---|
| Start bp | 374636 |
|---|
| End bp | 376560 |
|---|
| Gene Length | 1925 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638254277 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568464 |
|---|
| Protein GI | 58262108 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAC CAGTAGAGGC TGAATTTGCC CAACCCCCTA TCTACACCGA CGCTCAAGAA
GAAGTCCTTC GTGATGAAGA TGTGGAGGAA TCCGATGTGA TCACAATTGT TGCAAGTCGT
GAATCAAGGC CCGCCACTCG AACCAATACT CGTACGGACT CAGCCCATTC CCATTCCGCT
AGTACCCTGG CCGGAGAGCC ATCATCACAT GGCTCCAAAG AGGCTGTCCT TAAGTCTGCA
GGGGATGCGG AGAAGCTTGG TGATGGGCGG ATGACTGTGC ACTTTGACCC GGGAGAAGAT
CCCAAGGAAT GGACCAAGAC CCGAAAATGG CAAGTTCATT TATTAGTTGA CAATATCATC
TGCAAATGCT AACGACATCA CTACCAGGTA TGCCACCATT ACTGCCTCTA TTCTTTGTCT
TGTCGTCGCC CTTGGCAGTG CCATGCCAAC TGGTGACCTT CCTGGTGCTG CCGAAACTCT
TCACGTCTCC GACGAAGCCA TCTACCTTTC TATCACTCTT TTCGTCGCCG GTTTCGGCAT
TGGTCCTCTT ATCTTCGCTC CTTGTAGGTT TTTACATCTC CACCCATAAT ATATTTGATG
GTCTACGAGC TGACGATCGT CCTCCAGTGA GTGAAGTTAT CGGTCGACGA CCTATCTATG
CCGTCAGCAT GATCTTCTAC TTCCTTTTCA CTCTCCCTTC TTGTCTTGCC AAGAACATTG
CTACCATGCT TGCTGGTCGT ATGATTGCTG GTCTTGCTTC ATCCGCACCA TTTACCAATG
TAGGCGGTAC CATTGCCGAC GTTTGGGACA CAAAGGATCG TGGTCTCCCT ATGGCCATGT
TCAGTTCTAC TCTCTTGTAA GTGATCTTTT TTACTTATTG GGTAACCTTT TCTGACGACC
ACAGTATGGG GCCTTGTCTC GGTCCACTGT TTGGAGGCTG GATCGCCGAA AAAACCCACA
CTTGGCGTTG GATATACTGG GTTCTCTTCA TCTTCGTTGG CGCCGCTATG GTCCTCTGTA
TCTTCACTCC CGAGACTCTC GCTCCCCTCC TTCTTCGAAA GAAAGCCAAC AAGCTCAACA
AGAAATACCA GACTCAACTT TACGTCTCTG AACATGACCT TAACCGTCTC CCCTTCTCGG
AGACCCTCAA GAACGCCATG GTTAGGCCCA TTATCCTCAT GTTTTGCGAG CCCATCATCA
TTCTTTTCAC CTTTTACCTC TCCTTCGTCT ACGCCCTTCT CTACGCCACC TTCTTTGCCT
TCCCCATTGC TTTTGAGGAG ATTCGAGGTT GGTCTATGGG TATGACCGGT GTCACTTTCA
TCTCTATTAT TGTGAGCTAC ACTTTCTTGA TTATTATTTG CTGGACACCT CTAATCCTTT
ATCTTAGATC GGTATTGCCA TCGCCAACTG TTTGATGCCC GTCCAAGAGC GTCTCTACAG
GCAGCACAGT GAAAAGTACG GCCCAGCTCC TGAAGCTCGT CTCTACCCTA TGATGCTCGG
CGCCCTACTT CTTCCAGTGG CTTTGTTCAT CCTTGCCTTC ACTTCTTATC CTGGTATCAT
TTGGGTGGGC CCTTGCATTT CTGGTATCCT CTTCGGTTTT TCCATGGTCA TCATCTATAT
TTCTGGTAAC TCTGTAAGTC ACGCTTCATC TTGGTATCTT GTCGATCCGC GCTGACTTTC
TTTGTCAGTA CGTCGTTGAC TCTTATGCGA ATGTCGCCGC TTCGGCTATT TCAGCCAAGA
ACATGACTCG TTCCCTCATC GGTGCTTCTG TCCCTCTTTG GATCACCCAG CTCTTCCATA
ACCTTGGTTT CCAGTACGGT GGTCTTCTTC TTGCTCTTGT TTCTGTGGTC ATCATGCCCA
TTCCTTTCTA CTTCTATTAT AAGGGTGCCG CTGTAAGGAA GAGGTCCAAA AGGACTGTTC
AATAA
|
|---|
| Protein sequence | MLEPVEAEFA QPPIYTDAQE EVLRDEDVEE SDVITIVASR ESRPATRTNT RTDSAHSHSA
STLAGEPSSH GSKEAVLKYA TITASILCLV VALGSAMPTG DLPGAAETLH VSDEAIYLSI
TLFVAGFGIG PLIFAPLSEV IGRRPIYAVS MIFYFLFTLP SCLAKNIATM LAGRMIAGLA
SSAPFTNVGG TIADVWDTKD RGLPMAMFSS TLFMGPCLGP LFGGWIAEKT HTWRWIYWVL
FIFVGAAMVL CIFTPETLAP LLLRKKANKL NKKYQTQLYV SEHDLNRLPF SETLKNAMVR
PIILMFCEPI IILFTFYLSF VYALLYATFF AFPIAFEEIR GWSMGMTGVT FISIIIGIAI
ANCLMPVQER LYRQHSEKYG PAPEARLYPM MLGALLLPVA LFILAFTSYP GIIWVGPCIS
GILFGFSMVI IYISGNSYVV DSYANVAASA ISAKNMTRSL IGASVPLWIT QLFHNLGFQY
GGLLLALVSV VIMPIPFYFY YKGAAVRKRS KRTVQ
|
|---|
| |