Gene CNM00820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00820 
Symbol 
ID3255042 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp242488 
End bp243857 
Gene Length1370 bp 
Protein Length296 aa 
Translation table 
GC content46% 
IMG OID638254233 
Productchorismate mutase, putative 
Protein accessionXP_568424 
Protein GI58262028 
COG category 
COG ID 
TIGRFAM ID[TIGR01802] monofunctional chorismate mutase, eukaryotic type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACT TCACTACCGG GGCCAACGCT TCAGAACTTC TCTCTCTCGA TCGCATCAGG 
TCACAGCTTA TTCGGCTCGA AGACACAATC ATTTTCTGTC AGTAGTGCTT TGTCTCTCGT
GACACGCAGC AGATATCAAC AACACTGACT CTTTTTGGCT CTCAGTGCTT ATTGAACGAG
CTCAATTCGC GTACAACAAG AAAATCTACG AGGCCGGAGC ATTCAAGGAT GAAATTGATT
TTGAAGGAAG CTGGCTTGAA TGGTTCTTGT ACGAGACAGA GACTTTCCAT GGTAGGTTTA
GGACTTCGTT GAAGGCATTC AAAGACAGCT GACGGTTAGT CTCTTTTTAG CAAAGGCCCG
ACGCTTTACA AGGCATATGA TCTCAATCTT CGATGTTTAC TCTAGCTGAC CTTACTGGAT
AGCCCCGATG AACATCCTTT CACCCCACTG GACAGGCTTC CGCAGCCCAT CCTCAAACCT
CAAAAATTTC CTACTCTCTT GTATGAACCC GCTGCTACTC ACCCTTCTGT AAATGTCAAT
TCTAGGATCC TTCGGTTCTA TGTGGAGCAC ATCGTCCCCG GTATCACCGG TGCTGGAAAG
GGGAAGACTG AATCCGAAGA TGATGGTAAC TACGGCAGTT CAGCTACTCG AGATGTTGAG
GTATTGCAGG CTTTGAGTCG AAGGATACAC TTCGGTAAGT GAAAACTGAC ATTGGTTTAG
AGACTGTACT GATTTGACTA CGGCCAGGTA TGTTTGTTTC TGAGAGCAAA TTCCTCACCG
CACCCCACGA CTTCATCCCT CATATCCTCG CCTCCCCTCC AAATACCGAA GCTTTAGCGG
GTCTCATTAC CAAGCCTGCT GTGGAAGCAA AGTTGCTTGT CCGATTGGCT AATAAAGCAA
GGGTTTATGG GTGTGAGATG GATGTGGACG GTCGATTAAT TGAGGTTCCT GACGAGGAGA
TGGGTGCCAG AGGGAAGATT GATCTCGCCT CGGTGGTGGG CATGTACAAG GATTGGGTCA
TTCCTCTTAC CAAGGATGTC GAAGTGAGTT TTCTTTGAGA TTTCACAGAT GGTATAGACT
TGACATTACA AAGGTGGACT ATCTTATTCA TCGTTTGGAC GGCGTCCCTC AGTCTCAAAT
TGATGTTTGG ATGAAGGGCA AAAGCCAGTA GATTATATAC AGGTGGAATA TCATAATAGG
CAGGGGATGT AGTTTAACTT CTAAATTCTG TTTCTATAAT CTGTTTCCTT AAACAACAGT
AACGTTGTAG CAGGGGTCCG TGAACCAGGC TTGGAGAATA GGAAGCCTAT TTATCTGGAT
GTTCGACGCC TTGCGGAGGA TGGATGTACT TGGTGTACTG TTCCCATCCT
 
Protein sequence
MMNFTTGANA SELLSLDRIR SQLIRLEDTI IFLLIERAQF AYNKKIYEAG AFKDEIDFEG 
SWLEWFLYET ETFHAKARRF TSPDEHPFTP LDRLPQPILK PQKFPTLLYE PAATHPSVNV
NSRILRFYVE HIVPGITGAG KGKTESEDDG NYGSSATRDV EVLQALSRRI HFGMFVSESK
FLTAPHDFIP HILASPPNTE ALAGLITKPA VEAKLLVRLA NKARVYGCEM DVDGRLIEVP
DEEMGARGKI DLASVVGMYK DWVIPLTKDV EVDYLIHRLD GVPQSQIDVW MKGKSQ