Gene CNM00100 details

Gene Information

• Locus tag: CNM00100
• ID: 3255209
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: +
• Start bp: 22713
• End bp: 24782
• Gene Length: 2070 bp
• Protein Length: 560 aa
• GC content: 53%
• IMG OID: 638254170
• Product: expressed protein
• Protein accession: XP_568385
• Protein GI: 58261950
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3890] Phosphomevalonate kinase
• TIGRFAM ID: [TIGR01219] phosphomevalonate kinase, ERG8-type, eukaryotic branch.

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGCGAACTCG ATACAACACC TCTGCGTATC CCAAAAAGAA TGACGACAGG AACGACGACA 
GTGGTATCCT CCCCCGGCAA GGTACTCATC GCAGGAGGAT ACCTTGTCCT CGACACACAC 
TACTCTGGTC TAGTCATCGG CACTTCTAGC AGATTCTACT CTTGTGTCTC GAGCCGCGCA 
ACGTCAAGCC GCGCAACGTC CAGCACGCCA AGCATCGATG CCGATACCAA CACCGGCATT 
GACACAGACA CTTGTCAAAA TAAAGCGACC ATCTCGGTAC GCGCCGGCCA ATTCCCTCCC 
GACGCTTCGA CATGGGTCTA CTGCATCTCA AAACCTTCTG CTTCTGCTTC TGCTTCCGCC 
GGTGAGGACG GCGAAGAAGG TGAAGAAGGT GGAGATGGGA CTTTATATCT TAAACTAGAG 
CAGACCAATG AAGAGCAAGC GGGTAAAAAC AAATTCATCT TTATCACGCT TTGCAAAGTG 
CTCGAGTATG TTTACGAATC CATCTTGGCC CACGTTGGGG ATGAGGAAAC AGCATTGGAC 
GAGTTGATGA AGCGGATAAA AGGTGGTGGG GGTGGTGAGG ACGGTTTGGA CGTGGTCGTC 
TTTGCGGACA ATGACTTTTA CTCTCAACGC GAGCAGGTGC GTATGATATA TTTTCTTGTT 
AATGGGATAA TACGGCTTCG GACCTGACAG ACCTGTATCC CTTCAGCTCA CATCGCTATC 
CCTCCCAACC CGGATATCAT CCCTTCCCCA TCTCCCGCCA TTCACCCCTC TTCCCCGCCC 
AATCCCCGCA ACCAACAAAA CCGGCCTCGG CTCCTCTGCC GCCCTAGTCA CTTCCCTCGT 
CGGATCTTTG CTCTCCCACC TCCATATCAC CCATTCCTCT CCAGAGGGCA GTATCGCAGA 
TGACGACAAG GCTGTCATTC ACTCTGTCGC TCAGCTGGCG CACTGCCAAG CGCAGGGTAA 
AGTTGGATCA GGTTTCGACG TTTCCTCTGC CGTCTACGGT TCCCACCTCT ACACCCGTTT 
CTCCCCATCC ATCCTCACGC CGCTCATGTC CCTTGCCCCA TTCTCCCGAC CTCGACCCTC 
TCCCGGCTCA ACATCTCTCC TCCTCGATGC ACTCCACCCG AGCAAATGGG ATAACAAATC 
CATCCCTTTC CGACTCCCCA AACATTTGCG TCTCTTACTC GCCGACGTTT CGTGCGGTAC 
TGACACGCCA TCTTTTGTCT CCTCTGTCCT CAAGTGGAGA AATAACGATA GGGAAAAGGC 
CGATGAAGTG TGGGCGAGGC TGGATAATGC GAACAGGGCC TTGGGTAAGG TGCTGAGCGA 
TATGGTGGCC GCAGAAAACG AGATTGATTA TGAAAAAACC ATGATGGCCG CCTCAGAACT 
CACATCGGAC GAGGTACGTC CGCAAATCTC CTCTCCCTCT CTCTCCCATT CTTTCATTCC 
CCGTCACTGA CTTTTAACCG TCCTGTTGTA GCTTTTGAAC CTCCCTACAA CCCCGAGCCC 
TTCACGCACA CTCCATCTCC TCCACCGCCT CGCCCTCTCC CTCTCGTCCA TCCGCGCTCT 
GTTGCGTGAA ATGTCCGATC TCTCGGGCGT ACCCATCGAA CCAAAAGAAC AAACGAGATT 
GCTGGATGCA TGCGGACAAG TCAAGGGTGT TGTAGGCGGT GGCGTTCCAG GTGGTACGTC 
CTAAATTCCC TCTCGTCCCA ACCCCACTCG CAAAACTTTA TTCCCAGGGC CCTCAGCCCC 
ATCGTATAAC AGCACACATG CTCATGCTTC GATTTGTTTC TAGCGGGCGG CTACGATGCC 
CTTTACCTTC TTACCATCGA CCACCCAACC CCTATAGCAG GTGTCGATAA ACTTTGGGCA 
GAGTGGACGG AGATGGACGT CTGTCCCCTG TCCGCAAAAC AGAGTGATGG CGGGATAAGG 
CAAGAACAAG TTGCGGAAGT GAAGGGTTTA AAGGAAGCGC TGGAGAGAGC GAGGAGATGA 
GCCGTGCATC GGAAGATAGC ATATAAGGAT AAAGGTTAAT GCCAGGCTAA TAGATTCGTA 
TTGTGTTTAT ACCCTGCATG AGATATGCCG 

 

Protein sequence

MTTGTTTVVS SPGKVLIAGG YLVLDTHYSG LVIGTSSRFY SCVSSRATSS RATSSTPSID 
ADTNTGIDTD TCQNKATISV RAGQFPPDAS TWVYCISKPS ASASASAGED GEEGEEGGDG 
TLYLKLEQTN EEQAGKNKFI FITLCKVLEY VYESILAHVG DEETALDELM KRIKGGGGGE 
DGLDVVVFAD NDFYSQREQL TSLSLPTRIS SLPHLPPFTP LPRPIPATNK TGLGSSAALV 
TSLVGSLLSH LHITHSSPEG SIADDDKAVI HSVAQLAHCQ AQGKVGSGFD VSSAVYGSHL 
YTRFSPSILT PLMSLAPFSR PRPSPGSTSL LLDALHPSKW DNKSIPFRLP KHLRLLLADV 
SCGTDTPSFV SSVLKWRNND REKADEVWAR LDNANRALGK VLSDMVAAEN EIDYEKTMMA 
ASELTSDELL NLPTTPSPSR TLHLLHRLAL SLSSIRALLR EMSDLSGVPI EPKEQTRLLD 
ACGQVKGVVG GGVPGAGGYD ALYLLTIDHP TPIAGVDKLW AEWTEMDVCP LSAKQSDGGI 
RQEQVAEVKG LKEALERARR