Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM00030 |
Symbol | |
ID | 3255272 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | + |
Start bp | 5545 |
End bp | 7531 |
Gene Length | 1987 bp |
Protein Length | 468 aa |
Translation table | |
GC content | 51% |
IMG OID | 638254163 |
Product | multidrug transporter, putative |
Protein accession | XP_568393 |
Protein GI | 58261966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.678764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATT ACTATCACAA CATGCTTCAT GTGAGTAAGA CATTTGAGAG GCGTCACGCT GACTCGAGGG GAATAGTTCC ATTCTCACGG GTCTGCCAGC GGGCTCGTAT AGCGCTGGGA ATTCATACAT GGAACAGGAT TTTGGGATCA ATCAAGACAA CTTTCCATGG TTGACATGGG CTACGGCTAG CTGGAACGTA GGTGAGTCAA GAAAGGCCAA TGGGGCTGGT CTCGCTAATA TCATTTGTTA GGAGCCGCCG TTTTTCCCCT GCTGTTCGTC CCGCTCACTG AGAACTCTGG TCGGATGCCG GGGTATTTTG TGCGTGCTTT ATTTTTGGTC AATGATAAAC CTCACAAATG ACAAACCTCA CACCTCTGCA GATCTCTTAT ATCATTTTCT TGATCTTCCT TGTGCCGTCC GGCGTGGGCA CCAATTTTGC GACCATGGTC ACCACGAGGT TCTTTGGTGG TGGCGCTAGC TCAGTTTCGA TCAATATTGT CGGGGGGACA ATCGCGGATA TCGTAAGTTG GCGTTGTTCT CACCGTTAAC TGACTCAATC TCCAGTGGAA AGGCCCTGCC GAACGGAGCG TCCCCATGTC CATCTTCGGT ATGACGTCCG TCGTTGGCAT CGCCCTGGGA CCGTTCATCG GAGGCGCAAT TCAAACCAAC GAGACAACAA TCAACTGGCA CTGGATCTAC TGGATACAAT TAATTTTTGA CGGTGCTCTT CTCCCCGTCT TTTGGTTCAT CCTTCGCGAG ACAAGGGGCG ACGTAATCCT CGCCAAAAGA GCGAAACGTA TTAGGAAGGA GACGGGTCGT CAGGCCTATG CCAAAGCAGA GCTCGAGAGT GAAAAGGTCT CCACGATGGT CTTAATCTCG TTTAAACGTC CAACAAAAAT GCTTTTCACA GAATTCGCCG TCTTTTCCTT CACCTTATGG GTTTCGTTTG GTGAGTTGTG GTAGAACCGA GCTTTGCTAA CGTGTACTTT AGCATGGGGA CTGCTATTCC TCTTTCAGTC GAGCATCCCG CAGACTTTCA GTGCAAAGTG AGTGCGGTGA GGGATGTGGC CGCTGCTACC TGGCTTACAC ACGCCCAGCT ACGGCTTCAA TACGTTCCAA AGTTCACTGG TCCAACTCGC CCTTTCTGTC GGCGCGATCA TCGGCACGAT CATCAACCCT TACCAGGACA AATTGTACCT CCGATCCGCC CACCACAACA AGGAGACCGA GGGTAAGCCC ATACCTGAGG CCAGATTGTA CTTCTCCATC CCCGGCAGTT TGCTTTTCGC CGGCGCGTTG TTCTGGTATG GCTGGACCAG CTACCCGAAC ATCCATTGGA TTGTACCTAC CATAGCTATC GGTTTTATCG GTTTAGGCAT CTATGCTATT TGTAAGTTCT GCTGTATCAA ACCCACGCTG ATGCCTTGGC AGACATGGCC ACCGTGATGT ACCTCACTGA TGCGTATGAA AAATATGCAA GTTCTGCGCT CTCTGCGGCA TCTTTGGGTC GAAATTCATT TGGTAGGTCT CCAATCAACC AAAAAGAACT ACCACTGACT TCAATATCCA GGCGCTTTCC TACCCCTTGC CAGCCAGGAC CTCTTTAACA ATCTGGGCTT CCAGTGGGCG GGAAGGTAAG CGAATGGGTG TGAACCACGC GCTGATCATT TGGCCAGCTT ACTCGGCTTC CTGGCTTTGG CACTTTCGGG CGTTCCTATC CTCCTCTTCG TGAGTATCGA TCAGTGGTAT TGCACGAGCA TTTGTTGATT CGCGCCGCCT TTCAGTTCAA AGGCAGATAT CTCCGTTCGA GATCGCCGTT TATTGCAGAA GCGACCTTCG AAGAGGGCGA TTCGGAAGAA CGTCGCGAAA CAACTAAGCA GGAGGGGAGT AAAGGTCTTG GTGGTCCTGC CGGCCAGGCC AGGCCCACCG CGCCGACTAT CGGGAGGTAA GGAGACTTGT AAGATGTCAA GTACATGCAA TGTGGTG
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Protein sequence | MVDYYHNMLH DFGINQDNFP WLTWATASWN VGAAVFPLLF VPLTENSGRM PGYFISYIIF LIFLVPSGVG TNFATMVTTR FFGGGASSVS INIVGGTIAD IWKGPAERSV PMSIFGMTSV VGIALGPFIG GAIQTNETTI NWHWIYWIQL IFDGALLPVF WFILRETRGD VILAKRAKRI RKETGRQAYA KAELESEKVS TMVLISFKRP TKMLFTEFAV FSFTLWVSFA WGLLFLFQSS IPQTFSANYG FNTFQSSLVQ LALSVGAIIG TIINPYQDKL YLRSAHHNKE TEGKPIPEAR LYFSIPGSLL FAGALFWYGW TSYPNIHWIV PTIAIGFIGL GIYAIYMATV MYLTDAYEKY ASSALSAASL GRNSFGAFLP LASQDLFNNL GFQWAGSLLG FLALALSGVP ILLFFKGRYL RSRSPFIAEA TFEEGDSEER RETTKQEGSK GLGGPAGQAR PTAPTIGR
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