Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL04570 |
Symbol | |
ID | 3254780 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | - |
Start bp | 274224 |
End bp | 276859 |
Gene Length | 2636 bp |
Protein Length | 514 aa |
Translation table | |
GC content | 46% |
IMG OID | 638253928 |
Product | conserved hypothetical protein |
Protein accession | XP_568220 |
Protein GI | 58261620 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [COG5274] Cytochrome b involved in lipid metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGTAGGTGAA TGGTAGAGGA TAACTACATA TCTGTCTACT ATATTAAGGT CTAAAAACAA ATAATATAAT CTTGCTTTCA CCAACCCAAG AACATATCAA GAACGCCATA TATTGAAATT ACCACCATGT CACAACAAAA GCAGGTTGAT GGGAAGCAAG TGGCCGAACA TAACAGTCGC GAAAAGGTGC GTAATGGATG ATCAAGACGC AGACAATAGA AATATTACTG TCAGCGGTGT GAATCCTTTG GCACGTAAGG GTTTCCAGGC TGATGCAAAA ATTAGGGGGT ATGGATAGTA GTCCATGGTC AGTGCTATAA CATGTACCAG TAAGGGATTG CGAAATCAAC ACTGATGCAA CAAAACAGGA AATGTTTATG ATGTGTCGGA CTTCCTAGAT GTGAGTAGCA TCGCCTACCA GTACTCTCCT ACAGAATAGA CTGCTTACCA GACTGAACCT TTGATTAGGA ACACCCTGGT ATGTACTCCT CCCCTATTCA CCCAAAGATA GTCTACATGG GATGACATAA ACAAGGCGGA GCAGATATAA TCTTGTGCGT TAATGGGTAG TTGAGGGCCG CTGAAGCTAA TAATGTCTAT TGAAAGGAAA TACGCAGGAA AGGATGCGAC CGAAGAGTAT GATGTAAGTC TCCTCATAGA TGGGGTTTCT GCAAAGCGCA ATTTGTCTAA TGTTGATGAA GCCGATTCAT CCTCCCGACG CCATCAAAGA AAACCTGGAT CCCTCCAAGC ACCTTGGACC ACTCATTCCC TCCACCCTCC CAGTTGAAAA GCCAGCACCG GCACCAGCAC CTCCACCAAC TTCGGTTCCA GTTGGACAAG CGACCAATGG CACTTCTGTG ACTGAAGAAT TTGTTAAACC TTCTTTGGCA GAAATACTCA GTCTTCACGA TTTCGAAGCT GTAGCCAGGA GGACGATGAG TAAGAGAGGG TGGAATTATT ATAGCTCGTA AGTGTTTAGG AGCTGTAAGT TGGTACTGTC CTTACAGATG TGATAAACAG TGGTGCAGAC GATGAGGTTA CTATGGTATG TGCCGAAGGC AATACCAAAT TGCTGACAAA ATAGAGAGAA AACCATAACG CCTATCATCG GTCAGTAGGA AATCAATGGA AGATTGACGC CAAAACAATA GCGTTGACGT TAATGGGTTG TAGTGTCTGG TTTCGTCCGC GTATCCTTCG AAACGTCGGG ACGGTGGATT ATTCCACTGA GATACTGGGC TTCAAGACTT CAATGCCTGT CTATATCACT GCTACAGCGT TGGGTTCGTT TGCATCCTTT AGTCCCTAGG AATCAGACCT AATGGTGAAA CTGGTGCAGG AAAGCTTGGC CATCCTGAAG GTGAGATATG CCTTACAAAG GCTGCAGGGG AACATAATAT AATACAAATG GTGAGTCAAC CACGAATAGT GCATACAACC CCTAACTTAC GATAAGATCC CTACTCTTGC GTCTTGCGGG TTTGACGAGA TGGTGGATGC TGCTATACCT GGTCAAGTTC AATTCCTACA GCTGTAAGTA GCCTCAGCCT CTAATAACAG CCAAATATAT ATTGATATCC CTAGCTACGT CAACGCCGAC CGTGAGCGTA CTAAAAAAAT CATCAGGCAT GCTGCCGAAA GGGGTATCAA GGCTTTATTC ATCACAGTAG ACGCACCCCA GCTCGGTCGC CGAGAGAAAG TGAGTCTTCG CCAACGAATT CCGAACTACA TGTAACCTCT CCTTTTTAGG ACATGCGCAC CAAATTTGAA GGTACAGCCT CTGCTCAGCA GACGAAAGGC GGTGACAAAT ATCAACGAGA TCAAGGTGCC GCACGCGCCA TCTCTTCCTT CATCGACCCG AGTCTCAATT GGAGCGACTT GAAGGAGCTG GTCGATGCTG CGCGAGGCCT TAAAGTCATT TTGAAGGGCG TGCAATGCTG GGAGGATGCG GTCATGGCGG CTGAGGCAGG GGTGGATGGT GTGGTATTGA GTAATCATGG GTTAATACAA TCTTTTTTTT TACCTGGACA TTGCTAATGA AGATGGCCTA AGAGGACGTC AGCTTGACTT TGCGCCCTCC CCCTTGGCCC TTCTTCCTTC GGTCGTACAA CACCTCACTG CTCACGGGTT CATGAACAAT CCCCTTCGAC CCAGATTTGA AATTTTCGTT GACGGTGGTG TTCGGAGAGC AACAGACGTC TTGAAAGCCG TTGCACTTGG TGCGACAGCT GTGGGCATTG GGCGGCCGAT GATCTATGCC ATGTCAACTT ATGGAAAAGA CGGAGTGAGC CATGCTCTAC AAATCTTGAA GGTGAGTACA TCACTGGCCG AACTGAAAGA CTGGATGATG ATTTTCCCTT TCAAAACATA GGACGAATTC GAGATGAACA TGAGATTGTT AGGCGCTCCT ACGATGGCCG ATGTTGTGCC AAGTATGGTC GATACCTCTG GGCTTTTTGG ACCCCAAGGC AGTGTAACTA TGTATGAGGA AAACTGTGAG TTTATCGGGA GCTCTTTAGC TACTAAAATT ATGTAAGTCG CTGACTTGCA CAATGTAGAT GAGAGGATGT TACCTGTGGG TGTCAAAGCC AAACTTTGAT AGTAGTGCCC CGGGGAAAGT ACATTGCAGT CTGGTG
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Protein sequence | MSQQKQVDGK QVAEHNSREK GVWIVVHGNV YDVSDFLDEH PGGADIILKY AGKDATEEYD PIHPPDAIKE NLDPSKHLGP LIPSTLPVEK PAPAPAPPPT SVPVGQATNG TSVTEEFVKP SLAEILSLHD FEAVARRTMS KRGWNYYSSG ADDEVTMREN HNAYHRVWFR PRILRNVGTV DYSTEILGFK TSMPVYITAT ALGKLGHPEG EICLTKAAGE HNIIQMIPTL ASCGFDEMVD AAIPGQVQFL QLYVNADRER TKKIIRHAAE RGIKALFITV DAPQLGRREK DMRTKFEGTA SAQQTKGGDK YQRDQGAARA ISSFIDPSLN WSDLKELVDA ARGLKVILKG VQCWEDAVMA AEAGVDGVVL SNHGGRQLDF APSPLALLPS VVQHLTAHGF MNNPLRPRFE IFVDGGVRRA TDVLKAVALG ATAVGIGRPM IYAMSTYGKD GVSHALQILK DEFEMNMRLL GAPTMADVVP SMVDTSGLFG PQGSVTMYEE NYERMLPVGV KAKL
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