Gene CNK03200 details

Gene Information

• Locus tag: CNK03200
• ID: 3254699
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: -
• Start bp: 951984
• End bp: 958523
• Gene Length: 6540 bp
• Protein Length: 1871 aa
• GC content: 50%
• IMG OID: 638253811
• Product: bacteriophytochrome histidine kinase, putative
• Protein accession: XP_567913
• Protein GI: 58261006
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.796961
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAGACTCTC TTCCAGAGTA AAGTAAATCC CTTTTAGTCA ACGCACTCCA CTTCTTATAC 
CCAAGGTTTA ACTCATCGCT AGGCACAACG CATCCAAGTG GACCAGTCAC AAAAAACGCT 
AGCATAGGAG CCCGCGATCG ACGTCGTGCA GCGACGCCGT GTGGTCCCCT TCAAACACAT 
CCGCGTGCGT CTCCTTACAT CCAGTAGCAT GTAACAATGG TCGCTGACCT GTTTCTGTTG 
CGTACTGCAG ATCAACAATG CCTGACGGTT CCACATCTCC CCGCGAACCG GCCAACTCAG 
CCTACTCTAC CCACGAACCA CAATCCAAGC GTCATTCATC TCCTCAATCA GTAGCGATGC 
CCGCAGCCCC CCGCTTCCAT CGCCAACATA CCTCTAGTCA AGACCATGGG TCTAGCAGCA 
CCCCCATTTC ACCGGCGGCG TCGTCGACTG GGCCACTCAG TCCCAGCATT CCACCTGGAA 
GCTTCGTTTT TCCTATCCGA TCCGTGTTTC AGGGCATGGT CCATTCTGAC TCATCAAACG 
GCATAACAGA AGGTCATCAG CAACGGAAAA AGGATGGCTT GCAGCGCTCA TCCGGCAGCT 
CAAGCCCATT ACGGTCGCCG GCATTGTCCG ATGCTCACCG CTTTTCCACA GATGCGGCCG 
GGGCTTTGCA TGATGAGCCA GATGCCGGTA TTCAAACGAT TGCTCAAATG TTACAGCAGG 
ATGGGAGTGC TCCGCTTAAA GAAAAAGGCA AACATCAGCC AGGCGTGGCG ACTTTCGTGG 
GTAAGGCTGA AAGAGACCGT AACGGGTCAG GTGGAGGAGA GACTTTAAAG CCTTCTTCGC 
CTGATGCGTC CGGTCACCTA GGAAATTCTC CAATCACGCA TTCCAGCAGT GATTCCGAAC 
ACCAGAAACA ACAAGATGTC GCGAAGTCTT CTCGTTCTGA GGAAGGAACA AATGATAGTC 
CCGAGTCGTC GCATGGTAGC GGTGGAACTC TAAAACAAGC AACACGAACA GATCTGCCCG 
CAGCGCTGCA GCGGTCTTCA ACCGTCAAGG GCAAGGTTTC GGCGTCTGGC CTCACGAAAA 
CCTCCCCTTC AAACTATCGT CACTTCCCCT CAGAACACCA TTCTGGTCAG CGTGAACGGC 
GATTCTCAAC CGTTAACAAA GTCAACCCAC CTTCACGTAA TTCATCCTCC CATCCAGTTG 
ATGCATCTCA TCCACCAAAT CCTGAACTGC AACATCCTGT ACCTCGACGT AACACTCGGC 
AGCAGCATAC CCAAGACGCA GAAGGGAATA ATCGTACCAG CAGTCATGGT TCTAGGACTT 
CACTCGAGGT TGACGAGTCT GGTATGCGAT CACTTATCAG TGATATGAGT GGCATCGTTC 
TTCTTGGTGA AGCGGGATCA TGGGGTTCCA TGGGTGGTTC TGGAGTTTCT GGATCCAAGG 
GTACTGATGG CGGTACCGGG ACGACAGGAA CGGTCGATAG CGCGTCGATA GATAGTGGGC 
ATGCGACTGG TGGTCGTGGA CAAGGTGATG AAAGGCAAGT AACAAAAGCG AGTCTAGCCG 
CGAAGCATGG TGCAAGGCAG ACAAGTCGAC AGGATTCTGT GCGGAGCTTC ATTCAATCAC 
AGGCGGGTAC GACAAACCTG CAGGACCCCA ATGCTCCCAC TCTATCGCCT ATGCCAAGTG 
GTTCCCCTCC CGCGGAAGGT AGCCAGGATG CAACTGTCTC TATGGAGGAT AGTGCAAATA 
ACGAGAAGCA ACGAGAGCAG CAACAGGAAG AGGGAGAAGC AGAGCAACAG GGAGAAGAGG 
AGAATGGACA GGTGGAACAG CCCGTCGCCG CTTCTGCGGA GGATGCGGAA AATCCTGATG 
AACCTGCTGT CACCATGCGT TTTGAGCATG TCGTCACTGA AGAGGGACAT CACATCGTCG 
CTGGGCGAGA GGGCAGGTTG AGGAGATGTC AGGATGAGCC GATCACGACG CCAGGTGCTG 
TGCAAGGGTT TGGTGTGTTA ATGGTTTTAG AAGAGGATTA TGAGACGGGT AACCTCGAGA 
TCCGTCAGGT TTCTGAGGTA AACATCTTTG TTATAGTCAT GTCGAAATGT ACGCTCAGCG 
CTAACGGTGA ACTGCAGAAT TCAACCGAGA TACTAGGTCT ATCGCCCAAG TATCTGTTCA 
GACTTGATTG CTTTACCCGA TTATTATCAT CAGACCAGGA GACTATTCTT CGCGACACTC 
TTGAATACCT GCCCGAAAGC TATGGTGGAT CAAACAGCGT TGAAGATAGC GGTCCCTCAG 
TATTCCTGCT ATCTGGATTT GGTGAACCAG GGAGCGGTGT TGAAGAAGGT GAGACCGAAG 
GCGGACCCGA GACTGAAGTG AGATCTACTG CGTCAAGCGC TGGCGGCAAG AGAAAAGAAT 
GGACTTGCTG GGTTGCGGCG CATAGGCCAG AGCACCGAGG CTGGAACAAG GTCAACGAAA 
TAGGAGAACC AATCCCACCT CCAGATTGGA TCATCCTTGA ATTTGAACTC GAGCGAGACG 
TCTACAACCC CCTCGTTCAC CCTTCTGAGA ACGCCGAAAC TTCTACAGCC GCTGCGAACT 
CTAATGCCCG ATCGCTCCGT CCTGACTCTA CAGCAGCTTC CGTCTCTGCA TCCGGCTCCA 
ATTCCAACAG TAACACTCTT AGCGCAAGTA CTCGGTCCGG TGAGCGTACA CTCGACAGTC 
TTACAAGCAC TCTTGCAGGA GGCAGAGCTG GCGTCTCCGC TGGATTAGGC CCTGGCACAG 
CGAGCTCTGA TGCATCTCCT GGAGATTTGG GTTCATCGGC CAGTGACTTT ACTAGCGTTC 
CAAAACAAGA AGCGCGTATG GGTCTCGATG GGCTCGAAAT GCACATCCCG CTGGAAAAGA 
TTTTGGAAAG TACTACCAAC CATGCCAGCC CTCTTCGTGC ATTGGAGAGA ATGAGAGGTA 
CAACTGTTAA TGCGTCAAAT GAAGCGCGAT CGCGGGGACG AGGTCGAGGG CGAGGGCGAG 
GTGGAAGACA AAGACCTATC AGGACGGAGA GTGGTGGGAC GGGCACAATG GATATCTTTG 
CCGTACTCGG CCAGATCAAC GATCAACTTG TTGCCGCTCC CGACCTCGAC ACTTTTCTCA 
AAGTTGCCGT TGGTCTTATG CAAGATATTT GCCGCTTCCA TCGTGTTCTC ATCTACCAAT 
TCGACGAGCA GATGAACGGC TTGGTCGTGT CAGAGCTTGT AGAATGGGGA AAGACGACGG 
ACCTGTACAT GGGTTTAAGG TTTCCGGCCA CAGATATCCC ACCTCAGGCG AGAGAGTTGT 
ACAAGATCAA CAAGGTTAGG ATGCTGTATG ATAGGAGTCA AACTACAGCG AGGATGGTTT 
TGAGGAACAA GGAGGATTTG GATCAGCCGT TGGACATGAC ACATTGTTAT TTGCGAGCTA 
TGAGTCCGAT CCACTTGAAG TGTGAGTGAC TGGTATTAAG TGGGCATTCA GGTGCTAATG 
ATATCAGACC TCGGAAACAT GAGCGTACGA TCCTCCATGT CAATCTCCAT CATGGCATTT 
GGTCAGCTCT GGGGTCTGAT CGCCTGTCAT TCATATGGTC AACATGGCAT GCGAGTGTCT 
TTTCCTGTCA GGCAGATGCT TCGTCTCCTT TCCGACTCTA TCTCGAGAAA CATTGAAAGG 
TTGAGTTATG CTCAGAGACT GCACACTAGA AAGCTTGTGA GTTCATTTGT GGTCATTGAA 
GTAATCCTTG CTGATGACTC GTAGATCTCT ACTATCCCCG ACCGGTCCCA TCCTACGGGT 
TATATCATCT CCGACGCAGG TGACTTATTG CAGATCTTTG GGGCTGATGC AGGTTTGTTG 
GTCATTGGTG ACGGGTGCAA GCTCCTTGGG CAGTGAGTCA AATGCGTTCG AACACATGAC 
TGGGCACTCA TTGTAGTAGT AACGAGCAAG GTCAAGCGAT GCTGGCTATT GCCGAATACC 
TGCGTATCAA GCGATTCGAG TAAGTTTCAA ATGTTCCGAA GAAAATAGGC AGTACTAATG 
TCACCCAGCA ACCTCAACGC ATCTTCTTCT ATCCAACGCG ATTTTCCTGA CCTTGTCCTC 
CCTCGAGCTT CTGACACCAT TGCCGGTCTC CTCTACGTTC CTCTCACCGC CAAAGCTGGA 
CAAGATTTCA TTGTTTTCCT GCGCAAAGGC CAAGTCCGAG AGGTTCAGTG GGCTGGTAAA 
CCTTACAAGG ATGACAAGGC TAGTGAAGAG GCGAGTCTTG AGCCGCGGAA GTCATTCAAG 
GCTTGGACGG AAACGGTCAC TGGCTGCAGT CGAGCATGGA CAGACCATCA GCTAGAGAGT 
GCCGGGGTAC TCGCGTTGAT CTACGGAAAG TTCATTCAAG TTTGGCGAGA AAAGCAAACA 
GCCATGGCCT CCAACCAGCT TACGGCGATC TTGCTCTCCA ATACAAGTCA TGCTGTACGA 
ACTCCTCTCA GTCAGATCAT CAACACGCTC GAGTTGGCTT TGGCTGGGAA TATTGATGAC 
GATGTACGTA AGATGTTGGA AAACAGTCAC CAAGCCTCAA GAGCATTGTT GTTCCACGTT 
CATGATTTGC TCGATTTGAC TCGTATAGAG ACAGGCAACG AGACCGCTTT TAACGACCCC 
TTTGACATCC GGCAATCCAT TTCCGACGCT GTTCGATTAT ACCAAACAGA AGTTGCCCGA 
CGAGGGCTTG AATTTCGTGT CAACATGGCC GAAGATCTCC CTCAGTATGT CGTTGGTGAC 
TCTCGCAAAA TCAAGACCGT CATTTCCAAC TTGGTTGCCA ACTCTGTCAA GTTTACTGAA 
AAAGGATTCA TCGAGGTGTA TTGTGGTATT CAACGACCTT TTGATGGAGA GTCTAGCCAG 
ACGAGTCTCA CGGAGTCTAA GGAAGGGAAC ACAATTACGA TCGAGATCGT AATCAGCGAC 
TCTGGTTGTG GTATACCTAC AGTTCAGTTA GAGGAGATGT TTTTCACTCT CGAAGGTGCT 
GAACCTTTGC AGAAGAACAC TGGCGTCGGC CTTGGTCTTG CAGTCGTAGC GCGTATTGTG 
GAGCAACTCG AGGGTCAACT CCGTGCTGAG TCAGAGGTTG GCGTTGGAAC CAGGTTCTAC 
TTCAACGTTC CTATGGTCGC ACACCCAAGC GGAAGGCCAG GTTCACGCCA ATCCTCTCAC 
AATTCTCGTA ACACCAATTC GAGTCAGTTG CGAACTCGTA CAGGGAGCTC TGGTTCCAAG 
TCCGACTCAG TTGTGTCTCT TCGTTCCGAT GGTTCTGGGG TACCTGAAAT TGAATCCTTC 
GTTCAAGACT TTGGCGGTAG TCATTTACCT GCACCAGTGG GTGATGATGA CCCGCGGTTG 
TTGGAGGCCC AAGAGAGGAT GAGTAGATTG GGAACGTTCC CAGTGACAGA TTCGAGTTAC 
CCTGTCCGGG CTACTAAGGT TAACACTGAC GACCAGCACG TGAAGTCTCC AAAGCCGAAA 
AAGCCACGAT TCACCGCCAT TGGGTCCTCT GAACGTTCCA CTTCCCGCCA CAATACCACT 
TCTAGCAAGA CCTCTTCCGC TAGTCAATCC CCGGCCTTTT CTCGACCATC GTCAAATTCC 
GTTCAGGGTC CTAAGCGCAA CAAAAAGGGA CCAAACGGTA AGACAGTGAT GAGAATAATG 
GTAGTTGAAG ACGATCCGAT CAATTCGCAA ATCTTGCAGA AGAGGTTGAA AATGGACAAG 
CATGTTGTTG TGGCTGTTAC GAATGGGCAA GAGGCAGTGG ACCAGTTGGA GAAGGACAGA 
GATATCGATG CGATATTGAT GGATATACAG TGAGTTGGCG TCATTGCTCA TTATTATGCG 
TACTGACGTG GCGTCTAGGA TGCCCATCAT GGATGGTCGA ACATCTGCAA AGGAAATTCG 
TGAACTTGAA GCTAGAACTC CCCAACCAGA TGATATTGAG CCATTCAAGG TTGATGGGCG 
GACCCCCATC TTTGCCGTCT CGGCGAGCTT ATACGAGGAT GATAGGGCGA ATTTGGCAGA 
GAACTTTGAT GGATGGTTAT TGAAGCCTCT GGGTAAGTGC ACCCATACCG TATGTCAAGC 
CTGGCTAACA GCCATCATAG ACTTCTCCCG CGTTCGTGCA ATTTTAGAGG GGTTGGAGAG 
CTCAGAGAAG CGAGTAGCTG AGGTGTATCA GCAAGGCAAC TGGGAACGAG GTGGATATCT 
AAAGGGTGAA TCACACTTTC AGAAGATTTC TTCGCAATCA CACTGATATT CCCCGGGGTC 
TCACTTAGCC GCGCCTTTGC CTGCCTCCTC TTCTGCCTCT ACCCCTTCAA CCACACAATC 
TTCTCCCTGT ACGAGCACCT CATAAACCCA ATATTTGGTT ATTTTGTATC TCTTTCTCAT 
GGCGAATAAA AAGCATACTT CTTGATACTC CTCATTCGTA TAACCCTCAG ACGGATCTCA 
AGGTGCATCG TAGAAACTTG TAACACTAGG TCAACCACTT TTAGAACGAG TTTTTTAAAG 
GGTAACAGTA GTTATTTTGA ACATTTTTAT TTCGGAATCC ATAGACATTT TTATTTCCAC 

 

Protein sequence

MPDGSTSPRE PANSAYSTHE PQSKRHSSPQ SVAMPAAPRF HRQHTSSQDH GSSSTPISPA 
ASSTGPLSPS IPPGSFVFPI RSVFQGMVHS DSSNGITEGH QQRKKDGLQR SSGSSSPLRS 
PALSDAHRFS TDAAGALHDE PDAGIQTIAQ MLQQDGSAPL KEKGKHQPGV ATFVGKAERD 
RNGSGGGETL KPSSPDASGH LGNSPITHSS SDSEHQKQQD VAKSSRSEEG TNDSPESSHG 
SGGTLKQATR TDLPAALQRS STVKGKVSAS GLTKTSPSNY RHFPSEHHSG QRERRFSTVN 
KVNPPSRNSS SHPVDASHPP NPELQHPVPR RNTRQQHTQD AEGNNRTSSH GSRTSLEVDE 
SGMRSLISDM SGIVLLGEAG SWGSMGGSGV SGSKGTDGGT GTTGTVDSAS IDSGHATGGR 
GQGDERQVTK ASLAAKHGAR QTSRQDSVRS FIQSQAGTTN LQDPNAPTLS PMPSGSPPAE 
GSQDATVSME DSANNEKQRE QQQEEGEAEQ QGEEENGQVE QPVAASAEDA ENPDEPAVTM 
RFEHVVTEEG HHIVAGREGR LRRCQDEPIT TPGAVQGFGV LMVLEEDYET GNLEIRQVSE 
VNIFVIVMSK YQETILRDTL EYLPESYGGS NSVEDSGPSV FLLSGFGEPG SGVEEGETEG 
GPETEVRSTA SSAGGKRKEW TCWVAAHRPE HRGWNKVNEI GEPIPPPDWI ILEFELERDV 
YNPLVHPSEN AETSTAAANS NARSLRPDST AASVSASGSN SNSNTLSAST RSGERTLDSL 
TSTLAGGRAG VSAGLGPGTA SSDASPGDLG SSASDFTSVP KQEARMGLDG LEMHIPLEKI 
LESTTNHASP LRALERMRGT TVNASNEARS RGRGRGRGRG GRQRPIRTES GGTGTMDIFA 
VLGQINDQLV AAPDLDTFLK VAVGLMQDIC RFHRVLIYQF DEQMNGLVVS ELVEWGKTTD 
LYMGLRFPAT DIPPQARELY KINKVRMLYD RSQTTARMVL RNKEDLDQPL DMTHCYLRAM 
SPIHLKYLGN MSVRSSMSIS IMAFGQLWGL IACHSYGQHG MRVSFPVRQM LRLLSDSISR 
NIERLSYAQR LHTRKLISTI PDRSHPTGYI ISDAGDLLQI FGADAGLLVI GDGCKLLGHS 
NEQGQAMLAI AEYLRIKRFD NLNASSSIQR DFPDLVLPRA SDTIAGLLYV PLTAKAGQDF 
IVFLRKGQVR EVQWAGKPYK DDKASEEASL EPRKSFKAWT ETVTGCSRAW TDHQLESAGV 
LALIYGKFIQ VWREKQTAMA SNQLTAILLS NTSHAVRTPL SQIINTLELA LAGNIDDDVR 
KMLENSHQAS RALLFHVHDL LDLTRIETGN ETAFNDPFDI RQSISDAVRL YQTEVARRGL 
EFRVNMAEDL PQYVVGDSRK IKTVISNLVA NSVKFTEKGF IEVYCGIQRP FDGESSQTSL 
TESKEGNTIT IEIVISDSGC GIPTVQLEEM FFTLEGAEPL QKNTGVGLGL AVVARIVEQL 
EGQLRAESEV GVGTRFYFNV PMVAHPSGRP GSRQSSHNSR NTNSSQLRTR TGSSGSKSDS 
VVSLRSDGSG VPEIESFVQD FGGSHLPAPV GDDDPRLLEA QERMSRLGTF PVTDSSYPVR 
ATKVNTDDQH VKSPKPKKPR FTAIGSSERS TSRHNTTSSK TSSASQSPAF SRPSSNSVQG 
PKRNKKGPNG KTVMRIMVVE DDPINSQILQ KRLKMDKHVV VAVTNGQEAV DQLEKDRDID 
AILMDIQMPI MDGRTSAKEI RELEARTPQP DDIEPFKVDG RTPIFAVSAS LYEDDRANLA 
ENFDGWLLKP LDFSRVRAIL EGLESSEKRV AEVYQQGNWE RGGYLKAAPL PASSSASTPS 
TTQSSPCTST S