Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00720 |
Symbol | |
ID | 3254477 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | - |
Start bp | 233810 |
End bp | 235810 |
Gene Length | 2001 bp |
Protein Length | 501 aa |
Translation table | |
GC content | 49% |
IMG OID | 638253561 |
Product | conserved hypothetical protein |
Protein accession | XP_567634 |
Protein GI | 58260448 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.629397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CATTTCAGTT CTTCACCATA TCATCCATAG AAAGAATCCG ACATGGTCAA GGACAAAAAG CAAAGTAAAA AACGAAAGCT CAATGGTCGC GTTAACGAGC CAAAACCCGT CGCTTCTCTT CCTACCCCAC CGGGAGATAC CTCGTCTTCG TCGTCGCTCA TCGAACCTGA AGAGCTTGAA ACCGCTATCT ATGTCCTAAA TACGCTGTGC GAATTCCCCG AGGAGCTTTC TGACAAGAAG TACAAGGAGC TGAAGCGCTC TATGTACGAC CTGCACCGTG TTATGGCAGA CGGGGCAACA CTGGGTAAGT GGAGGAACGC TTTTGGTCTC CATTAAACAT CATAAAAATG ATGCTGATCA TGAACATCAG GCGCCTCCCT TACCTCCAAA ATCTCCGCAG CTCTGCAGGA CTACCGATTC AGCGATGCTC TGATCTTCTT ATTCGAGATG TACACGAGGC GTATCGCTCC CAAGCTGGGT GCTCTTCAGC GATGGGTCAG AGAGTGCGAT GCCACTTCAG CCGCCGATGG CTCGCCTGGC GACGCCGAAG CTCTGAAATG CCTGGATCTT ATCCTTCGCA TTGCCAATAT GACCAATGCC GACGAGCAAG CTCAATCTGC ATCCGCCAAT TCAAGTTCTT CGGTGATCAA CCACAGAGAG CCTTGGGTTG CGAGAGGACC AATTGAGGGC GAGATCGCCA TCTGGGAAAG GATGCAGACG GGAGCACTGT TTGGTGTGTA TCTTCTACAG TTATCAACTC GTTAGTCTAA TCCCCTATCA GACGGTCAAA TACCGCCCAA GCCTTATCCC CACTTCCGTC CGGTCCATCA TGTTCCTGCC GCCGAACGTC GTCCACCCAA TCTTTACGAC TCCACTGTCT ATGGATCCTC CCCCTCGGCT ATCACACTCA CACCCAAAGA ATCTCGGCCC AGGAAACCTT CGAAGATGGA AGTACCGGGA GTCCCAGGGG CATTCATCGT GCTGGATGTT TTCACACCGG AAGAGTGCTT GCAGATTGTC CAGGCCGCAG AGGCCATTGG ATTCGACAAG GACGAGGCTG CTGCTGGTTC AGCAATAATG AAGACATCTG TGTGTATCAT CTTCGCATTG CATATGTAGC CACCCCTAAT ATTTTATCAG ATCCTCGCCC GAAACTTCGT CTGGCTTGCA GACACACCAT TCTTGGAACA CTTTTACTCT CAAATCCTTC CCTTTGTCCC TCAAAGAGCA CCTGTTTCTC CTGATGGACA CGGAGGCGGG AAAGTGCGGG GTATCAATGC CAGGTTCAGG GTTTATCAGT ATAACGAGAA CCAACTCTAT CGCGTGAGTA TAACAATTTA TCTTGAAGTT TGCACATTTT GATGATCTCT TTAATTAGCC GCATATTGAT GGCGCTTGGC CTGCTGCAGG ATTGCATCCC GAAACTGGAG AGTACCTTCA CGAGTAAGCA CATGTTACCG TGTTTCTTTC ATCGCCAACT GATAAGTGGT CTATCACAGT TCGTCGCCAC CCGACGACCC CTTATGGTCC AGATACACTC TCCTCGTCTA TCTCAACTCT GATATTCCAG ATGACACTGG CTGTACAACA TTCTTCTTGC CTTCAGAAAC CATGGGCGTG ATGGAAGCCA CCTCTGTGAA ACCCGTCCAA GGAGCCGTAC TTTGTTTTCG TGCGTTTCCA TTTTTTTTTT GACGAAAAAT TATTGCAAAA ACTTCTGAAC AGCGCTGATT TTGTTGTTGC AATGTACAGC TCATGGAGAT ACGCAAGGTT CTCTCTTGCA TGAAGGTAGT GCAGTGGGTG CGGGGGGCGG CAAGTTGGTC ATCCGCACTG AACTTCTCTT CGAAGCTCCA GGCTTCGGGC AATTCAAACC TCCCACCAAC GGTAACGTCA CTGCTCAGTC GTGAGAGGTT GTGCATGGTG GTTTTAACGT AGCGTACTTG TATCATATCT GACCATTAGG GTCTCTTTTT ACTTGTTATT TATGTATAGG TTTGGAATCA T
|
Protein sequence | MVKDKKQSKK RKLNGRVNEP KPVASLPTPP GDTSSSSSLI EPEELETAIY VLNTLCEFPE ELSDKKYKEL KRSMYDLHRV MADGATLGAS LTSKISAALQ DYRFSDALIF LFEMYTRRIA PKLGALQRWV RECDATSAAD GSPGDAEALK CLDLILRIAN MTNADEQAQS ASANSSSSVI NHREPWVARG PIEGEIAIWE RMQTGALFDG QIPPKPYPHF RPVHHVPAAE RRPPNLYDST VYGSSPSAIT LTPKESRPRK PSKMEVPGVP GAFIVLDVFT PEECLQIVQA AEAIGFDKDE AAAGSAIMKT SILARNFVWL ADTPFLEHFY SQILPFVPQR APVSPDGHGG GKVRGINARF RVYQYNENQL YRPHIDGAWP AAGLHPETGE YLHDSSPPDD PLWSRYTLLV YLNSDIPDDT GCTTFFLPSE TMGVMEATSV KPVQGAVLCF PHGDTQGSLL HEGSAVGAGG GKLVIRTELL FEAPGFGQFK PPTNGNVTAQ S
|
| |