Gene CNJ02390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ02390 
Symbol 
ID3254164 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand- 
Start bp698673 
End bp699373 
Gene Length701 bp 
Protein Length188 aa 
Translation table 
GC content66% 
IMG OID638253396 
ProductER to Golgi transport-related protein, putative 
Protein accessionXP_567437 
Protein GI58260054 
COG category[N] Cell motility 
COG ID[COG5603] Subunit of TRAPP, an ER-Golgi tethering complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00139062 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTG CAGAGATTTG TTGCGCGCGT TGTCTCCTCC GTGCCGCCAT GTCGTTTTAC 
CTCGCCGTCG TCTCCCCCCG CGACTCCCCC CTCTTCGAGC TCGCCTTTGC CTCCGCCAAG 
CCGCCCCCGC CCCCCGCCGC GGCCCCCCCC GCCTTTCCCT CCTGGGCCGC CTTCGCCGCC 
GCCGCCGACC CCCACGACGC CCCCCCCGCC CCCGCCGGCC CGCTCATCGA GTCCAGGACC 
GCGCAGCAGC GGGACAGGGC CCTCTGCCAG ATGGTCGCCC ACATGAGCCT CGACAGCGTG 
GAGGAGGTCA TCGAGGGCAC AGGCGCGCTG TACGTCCGCC CGCCGCCCGC GGCCGCAGCT 
GACAGCGTGC AGGTATCTGA AGGGCGTCGA CCGGCACAAC GAGTGGACCG TGTCCGCATT 
CATACCCACG GGAGGTGAGT CGCAGCCGCC ACAGGGCCCT GGCTGACGGG CGCACAGTCA 
AGTTCATTCT CCTGCACGAC GTCAAGAACG ACGACGGGAT CCGGCTGTTC TTCATCGACC 
TCTGGGAGGC ATACGTCAAG GTGGGTGGAC ATGTGCATAA ACGGGGCTGA GACACTGCAC 
TGTAGATACT GCTAAACCCA TTCTTTACCA CCAACACGCC GATAAAAAGC CCGGCGTTCG 
AAGCCAGGGT GAAGAGCATC GCCAAGCGGC ACTTGTAGAC A
 
Protein sequence
MDFAEICCAR CLLRAAMSFY LAVVSPRDSP LFELAFASAK PPPPPAAAPP AFPSWAAFAA 
AADPHDAPPA PAGPLIESRT AQQRDRALCQ MVAHMSLDSV EEVIEGTGAL YLKGVDRHNE 
WTVSAFIPTG VKFILLHDVK NDDGIRLFFI DLWEAYVKIL LNPFFTTNTP IKSPAFEARV 
KSIAKRHL