| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01360 |
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| Symbol | |
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| ID | 3254092 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | - |
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| Start bp | 383004 |
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| End bp | 385421 |
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| Gene Length | 2418 bp |
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| Protein Length | 542 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638253292 |
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| Product | carboxylic acid transport protein, putative |
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| Protein accession | XP_567513 |
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| Protein GI | 58260206 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00179855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCGCCTTGT ACTTACACGC CATCCATTAA TCACTAGCGA CCTACAACTA AGCCAATAGC
CATAGCCGTT CATAACTGCT TCGCCTTGTG TTCATCAAGG ATCACCACAT GTCCACCTCA
CACCTTCCTC ACCACGCACA GGAGCAAAAG ATTCGCCACG AAGATGAGTC TGAATTCGCC
CTTCCAGCGC GCCGCTCCTC TTCTATCCGC GATCAATTAG CAGCATGGCA CGCCAACAGA
GGGGACAGGT CCTTTTTGAG ATGTATGATT CCCAGTCTAC GACAGCCCGT CGCTGGAGAA
GAACCTGAAA CAAAGAACCC TTTTAAAATC ATTCGAGCTG TTTCCCCTTT TGGATGGTTG
ATGTTTTTCT CGGTAAGCGC AATATTTCAT TGCCAGGAGT GTCCCAGTTG ATCTGTCCGC
AGGGGTGGCT CGCATGGACA ATTGATGGTT ACGACTTTTT CTGTGTTTCC CTCACCCTTG
ACTCCTTAGC AGAGCAATTC GATGTCTCTC CCAGCTCCAT TACTACTGCC ATCACTCTTA
CCCTTCTATT TCGTTCATTG GGTGCCGTTA TCATTGGTCT TTGTGCCGAC CGTTATGGAC
GAAAGTGGAC CTTGGTTTTC AACTGCCTTT TGATCATGGT ATTCGAGCTT GGATCTGGGT
TTGTCAACAC GTACCAGCAA TTCTTGGCCG TCAGGTGAGT TGCTCCTTTC TCCGCTGTAA
GAGCTGTGCT GATCGACAAA CAGGAGTTTG TTCGGTATTG CTATGGGCGG TATCTGGGGG
TGTGCTGCAG CCACGTGAGT ATTCTATTAC CTTCTTGAAG CGATGTACTG ACTCTGTATA
GTGGTCTTGA GAATGTGCCT CCTATTGCCA GAGGCTTGTG CAGTGGTATT CTCCAGCAGG
GTTACTCCTG TGGCTACCTT CTCGCTGCAG GTATGTGTCA ACTCTTATTT CGCACTTATT
CATTAAGCTG ACTTACCACT TTAACAGTCA TCAATCTGAC TGTCGTTCAG CAGAGCAAGT
ACGGTTGGCG AGCGATCTAT TTCTTCGGTG CCGGTTTCTC TCTGCTAGCC GCTATTGTCA
GGGCTTGTCT CCCGGAATCC CGACAATTCA TTGTCGCTCG AGAAGAAGCC AAGGCGAAGG
GTATTTCCAG CAAACAGGCC TCTAAGAATT TTATCCGAGA ATTGGGCAAC ATGTTCAGAA
CTAACTGTAA GATTTTCCAA GAAAACTGGA GGGAAGGATC TGATAGTTCG CGGCAGGGCT
TCGATGGATA TGGGCTGTCT GCCTTATGAC TTTCTTCGTC AGTCTCTTGG TGGTATACCA
CAGTCTTAAC AACTAACATT TAGATCAGAA CTTCTTCTCC CACGGTAGTC AGGACCTTTA
CCCGACTTAC CTTAAGACCA CTAAAGGTCT TTCCAGTTCT CTCGCCTCCA AGGCTACTAT
CATCTCTAAG TGAGTTTTGC AGCCCGTTGT ACTTTCCTTT CTGCTAACAA GCTGTATAGC
TGTGGCGCTA TCGTCGGTGG TACTATTGCT GGTCACGTCT CTCAATTTGT AGGCAGGCGG
TTCGCAATCT TGGTGTGTTG TATTTACACG GTAAGTGCAC ACTTGCTTCA TTTACTGTTC
GCTAATACGT GCTCATAAAC TCCTAGGCTT GCTGGATTCC TCTTTGGATT CTTCCCGATA
GCTTCGCTGG ACTTGCTGCT GGTGGTTTGT AAGTAGAGAC CGTCTGGTCT CGCAGATCAT
GGCGGCTGAC AGTATCTCCT TCCCCAGCTT CATTCAAAGT GGTGTCCAGG GAGGCATGTT
GACTTGACTG CGTTGATTGT GAAATCCTAT ACTGACGAAT ATCGTAGCTT GGGGTGTTGT
CCCTGTTTAC CTCGGCGAAA TTGCTCCTCC AGCTTTCCGT GCTCTCTTCG GTGGTCTCTG
CTACCAAGTA AGTTGTCTGA TTATTTTTGT GGCCTTGAGA GAGAAGACTT ACACCAACCA
TTAGCTTGGT AACATGGCCT CTGCAGGTTC TGCTCAAATC GAAGCCGATG CTGGTAAATC
CCTCAAGCTG GCCGGTACCG ACATCCCAGA CTACGCTGCT ATCAACGGTA TCCTCATCGG
TGCTGTCATT GCCTTTGGTA TCATTGTCGT TTTCCTCGGT CCCGAGGCGG ACGGATCCCA
TTTCGAAAAG GCCAAGGTCG CTATCGAGCG AGGCGGGGGC GAAGTTGCTC CTACCGAGTT
GTTTGAGAAC AACACCGATG TACATAGACA GTTCTTGGAC AAGCCTGAGC TTTCACACAT
TGAGAAGTCT GAGGTTCAGC ACAAGGAAAT GGCTTAAATG GCTTAAACAC CTGTCATTGT
CGCCTTGGGT TCAGGCTGGC TTTTATCGTG TTTAATTAGT TTCGTGATCT CTAATGATAT
TTGTATAACT ATTCTCGC
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| Protein sequence | MSTSHLPHHA QEQKIRHEDE SEFALPARRS SSIRDQLAAW HANRGDRSFL RCMIPSLRQP
VAGEEPETKN PFKIIRAVSP FGWLMFFSGW LAWTIDGYDF FCVSLTLDSL AEQFDVSPSS
ITTAITLTLL FRSLGAVIIG LCADRYGRKW TLVFNCLLIM VFELGSGFVN TYQQFLAVRS
LFGIAMGGIW GCAAATGLEN VPPIARGLCS GILQQGYSCG YLLAAVINLT VVQQSKYGWR
AIYFFGAGFS LLAAIVRACL PESRQFIVAR EEAKAKGISS KQASKNFIRE LGNMFRTNWL
RWIWAVCLMT FFNFFSHGSQ DLYPTYLKTT KGLSSSLASK ATIISNCGAI VGGTIAGHVS
QFVGRRFAIL VCCIYTACWI PLWILPDSFA GLAAGGFFIQ SGVQGAWGVV PVYLGEIAPP
AFRALFGGLC YQLGNMASAG SAQIEADAGK SLKLAGTDIP DYAAINGILI GAVIAFGIIV
VFLGPEADGS HFEKAKVAIE RGGGEVAPTE LFENNTDVHR QFLDKPELSH IEKSEVQHKE
MA
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