Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ00390 |
Symbol | |
ID | 3254112 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | + |
Start bp | 100467 |
End bp | 103807 |
Gene Length | 3341 bp |
Protein Length | 1030 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253196 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative |
Protein accession | XP_567295 |
Protein GI | 58259765 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACCAA GAGCCCACAG ATTAGTCAAT CAAAGGCCAG GGATCGCTCT TCGACCTCAC GCAAGCCACG TTTCCTCAGC GGCAACTTCG GCAGTTAGAC GTTCGGTGGC AAGTCAAGCC CAAGTAGCCC AACCCCCGAT CCATCCTGAA ATTGATGGCA CATTCAATGA TCTGATCGGG GAAGGGACTA TGAACATGGG AATGAAACCT AGAGGAAGCG ACAGGACGTC ATTGCCATAC AGAAATATAA ACGAGATCGA ATTGGCGGAT CATCAGCCTG TCCGACATAG CGGAAGAAAG TGGTCATCTC TAGGCTTGCG AATAGAACAG AGTGATCTCG TCATCGATGA GTCGCCAGAA GTTTATAACT CTGCCTCGGA AGGGGAATAC CATGATTTTG GTCGAGAAGA AAGGAGGAGC CCAGCTGCTG TCTTGGGAAG CAAGCGTCTG GGAATGGTAG TCTTGCCGGA GGAAATGCAG CGAGGTATTC AAAGGCAAAT CGACCGTAAG CATATTTGAT TTGAGAAGAC ATCAAGGCAA GTTATACTGA CGATGATCTA GTCATGGACA ATCCCCGAGA TATTCGAAAA TCATATCTGG CGCTTCCCAA TGTTCCTACA CCCATTAGCG CTACAAAATC GGAGCGTAGA GATAAACCGT TCCGCACACC GGAAGGCGAG CTTGCCAAAG CATCCGCAAT CCTTCCCGGA GAGTATGGTG CGGTCAAGAA TGTGCTGGAA GAATTGGAGA GAAGGTTAGG TCGAGAATGG TTGACAAGTG CAAAGGAAGG AGAGATCTTG GAGTTCTCAT CTAGCCTGGG GTCTGGCCTT TGGTAAGTGC AGCTCTCGTG TTTTCTGCTA GCAATGTTAG TTATTAAGCT TCGTAGGGCT ATCATGGATG TCATGGGTGG TCTGCTCTCT TCTCGCCGGA GATGGCAGGA AGGACAGGAC AAGTTAAAAT ATCAATTTGT ACACTCTTCT AGACATGGTC TTGACCTCGT CCAAAGAATA GCAGAGGGTA TGTGCATATC CAATACGTAA CTGTACGTGG GCTAATTTTG TTGCGTAGTC ATCCCTGAGG AATCTGCCGA CGTTCAGTTC AACCGCAGAC ATGTCCATTC TTCGACCCCA TCACTAATTC TTTCCACATT CCATTTAACC TCTTTCCCTA CATTACCAAC CAGACAACTC TACCTGCGTC AACTTTTAGA GCTCTCATCT CCTTATATCG TCCTCATCGA AAGGTCAACA CCCCAAGGCT GGGCCGCTAT CTCACAAGCC CGCTCATACT TACTCGAGAA ATCAACTTCC GAAAACCCCC TTCACGTGGT AGCTCCCTGT CCTCACGATG GGAAGTGCCC TTTGGTCGGA ACCAAGGATG TTTGTGGATA TAGCCAGAGA CTTCAAAGGC CTTCTTTCCT GAGAAAAACA AAACACTCAT CTAGGGGAGA GGAGGAAAAG GGTTACTGCT ACCTAGTGAT CGCCAAGGGC GAGCGTCCCT CCGTTGGCAC CGTAGCTGAG GATATGAAAG TTGCTGGAAG GATGGGAAAG GTGGGACGGG AAGCAGCTGA AAAAGCGTTG ATCAAGTCTC AAGGCCGATC GATCATTCAA GAAGTTGAAG GTCACGAAGC GGTAATGGAA GTTGTGCGCC TGCATGAGAT AGAGCCTGGT ATGGAGAACT ATTTTGAAGA GACGTCACCC TCTGTCAACT CGGAAGAATT GGAAGAGAAC TTAAGAAAGG AGGCGTATAG CTGGCCGAGA ATGGTTGCTC CACCGATGAA GAGGAAGGGA CATGTCACCA TGGATACTTG TTGCGCTGAT GGTGAGTTGC AACGCGCCAA TATCCAATGT TCAACGATTG ACATATCTCA GGTAACATAC AACGTCTTAC CTATACCAAG TCGCATTCCA AGCAAAGCTA CCATGACGCT CGTAAATCTT CTTGGGGTGA TCTCTTCCCC CACACTTCCA AAGGCAAGCC TGTTATTCGA ACCCGTGGTG TCAGACGACT TGCAAAGTCC GAAAACAATG GGGATGCGGA CGCAGTTATC AGCGAACTCT TATCAGCAAG CTTGGAGGAA GAGATGGAAC TCGAGAAAGC TATGGAGGCG GTGGAGGTTG ACGAGCTGAA GGAATTGGAA ATGTTGGGCA TTAAAACTCC CAGGGCTGAA GTCTCCAAGG AAAGGCAGGA TGACGATATG CTGGTGTGGA AGTCGAACAA GAATGGACCT TTTGCTTCCG GGCAGAAAAG GAGCTACAGA ACTTTAACAT CGACGAGGAG CACTTCACAA CCTAAGACGC CACCTTCCAT TCAGACTCGA TCAATGTCAG CTCGCCCGGC TCCTCCAATT AGGCCCAAGG CGACCCTTTC ATCCTTGTTG TCACTCGCTA AATCTGGCAC CCCCATCAGC GTTCTCACTG CTTACGATTA CCCCACTGCT CTCCTCTCCG AATCCTGCAA CCTCGATATG ACTCTCGTTG GAGATTCACT TTCTCAAGTC GCTCTCGGTC ATGAGACAAC TACAGCTATT ACCCTTGATG AGATGATCCA CCATGCACGA ACGGTTGTAC GGGGTGCGAA AACACCTTTT GTTTTTGCCG ATATGCCCTT TGGTAGCTTC GAGACTTCCT TAGAAGAAGG CGTCAGGAGT GTCTTGAGGA TGGTTAAAGA AGGTGGTGTA GATGGTGTCA AAATCGAAGG TGGTCGCGAA ATTGTCCCTC TTGTTCGACG TCTTTCCGCT ATTGGTATCC CTGTTATGCC TCACCTCGGC CTGCAACCTC AACGAGCCAC CAGTCTGTCA GGCTACCTCG TTCAGGGGCG AACCGCTCAA GCTGCTTATG AGATCCTGCA AAGTGCTCGA GAGCTCGCGA ATGCTGGGGC TTTCGCATTC CTTCTCGAGG CAATGCCCTC AAAGGTTGCG AAGCTCGTTA CTGAGGAAGT TGGCAAGAAG GGTGTATTCA CAATTGGTAT TGGTGCTGGA AATGGGACCA ACGGCCAGGT TCTGGTTATC ACCGACGTGC TTGGTATCTA CGCTGAGGAT CCTCCTGAGG ATATAGCCAC ACCCAACGTT ACAGGAGAAA CCGAGCTTGT CTCTACGTCT CGTGATTTCA CCAAGCCTCT CGACGCGCCA CGATTCGTTC GTCAGTTTGG GTCGCTCGGG CAAGAGATGC GCCGCGCTGT GCGTGCATAT GTGCAAGCTG TTAAGGGAAG AAGCTTCCCC GACTCCAAAG AGAGCTATGG GATGAAGAAG GAGGAGTGGG AGACGTTTTT GGAGATGGTC AAGCGCGAGA AGGACCAGCA TTAATGAATA GAAATTAGAG CATACCTTGT GTCATTATAT A
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Protein sequence | MLPRAHRLVN QRPGIALRPH ASHVSSAATS AVRRSVASQA QVAQPPIHPE IDGTFNDLIG EGTMNMGMKP RGSDRTSLPY RNINEIELAD HQPVRHSGRK WSSLGLRIEQ SDLVIDESPE VYNSASEGEY HDFGREERRS PAAVLGSKRL GMVVLPEEMQ RGIQRQIDLM DNPRDIRKSY LALPNVPTPI SATKSERRDK PFRTPEGELA KASAILPGEY GAVKNVLEEL ERRLGREWLT SAKEGEILEF SSSLGSGLWA IMDVMGGLLS SRRRWQEGQD KLKYQFVHSS RHGLDLVQRI AEVIPEESAD VQFNRRHVHS STPSLILSTF HLTSFPTLPT RQLYLRQLLE LSSPYIVLIE RSTPQGWAAI SQARSYLLEK STSENPLHVV APCPHDGKCP LVGTKDVCGY SQRLQRPSFL RKTKHSSRGE EEKGYCYLVI AKGERPSVGT VAEDMKVAGR MGKVGREAAE KALIKSQGRS IIQEVEGHEA VMEVVRLHEI EPGMENYFEE TSPSVNSEEL EENLRKEAYS WPRMVAPPMK RKGHVTMDTC CADGNIQRLT YTKSHSKQSY HDARKSSWGD LFPHTSKGKP VIRTRGVRRL AKSENNGDAD AVISELLSAS LEEEMELEKA MEAVEVDELK ELEMLGIKTP RAEVSKERQD DDMLVWKSNK NGPFASGQKR SYRTLTSTRS TSQPKTPPSI QTRSMSARPA PPIRPKATLS SLLSLAKSGT PISVLTAYDY PTALLSESCN LDMTLVGDSL SQVALGHETT TAITLDEMIH HARTVVRGAK TPFVFADMPF GSFETSLEEG VRSVLRMVKE GGVDGVKIEG GREIVPLVRR LSAIGIPVMP HLGLQPQRAT SLSGYLVQGR TAQAAYEILQ SARELANAGA FAFLLEAMPS KVAKLVTEEV GKKGVFTIGI GAGNGTNGQV LVITDVLGIY AEDPPEDIAT PNVTGETELV STSRDFTKPL DAPRFVRQFG SLGQEMRRAV RAYVQAVKGR SFPDSKESYG MKKEEWETFL EMVKREKDQH
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