| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI00380 |
|---|
| Symbol | |
|---|
| ID | 3259405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | + |
|---|
| Start bp | 92371 |
|---|
| End bp | 94077 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638258522 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_572767 |
|---|
| Protein GI | 58271222 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGATTCGTTC GTGCACGGCA GGAAGGGAAT CGTCTATCAG ATGGGGTCTG CGTTTTCCGT
GTAAAAGCAT CCAGCCTTGA CCTTCTTATA CAGCCATCTA TCCCTCGAAG CATCTACAAA
CGACATCCAT GTCAACATTC ACTCCCCTTT CCCTCTACTC CCTCCCCTCC AAGTCAGCCC
TCGTGGACGA GTTTGTGGGA CAACCGCTCT CAGCTCTTCG TACACCTGCG CTCATAGTTG
ACCGTAAGAA ATTCAAGGAC AACTGTGAAA GAGTTGCTAG CAATGCCAAA GAGAGAGGAA
TGAAATTTAG GGCACATGTG AAGAGTAAGT TTCCATCGAT GTTTTTGTGG AGATGATGCT
GATAAAGTAT ATAGCGCACA AGACTACAGA GGGGACGAGG ATGCAGGTAG AAGCTGCAGG
AGGGGTCAAG GCCACCATTG CATCCACAAT GGTAGAAGTT TGGCAGATTG TTGAAGCGGG
TCTTGTGAAT GAGGGTCTGG TAAACGACGT ATATCTACCC AGCTTGTAAT GATATTGGAG
GTCCAGCTGA CGGCCTCGGT GCAGATTTTG TACTCCATGC CTATAAGTGC CGACAAGCTG
GAAGATATCA ACTCTGTCCA AGAGATAGTG GGAGCTCAGG CCACTATCCG CTTAATGGTA
GACCATGCAG AACAGATCAG GATTTTGCAG TCATTCAGCC AGAAAATTCA GAGACCTGCC
AGATGGTCAG TCTTTGTCAA AGTCGACGGT GGTGGAAAGT GAGTCTCTTA CCTTGTATGG
ACGGATGACC AGAGTGGGTG GCAGAATGGT GGGGAAGTCA AGATGAAGTC AAACTGATGA
GACCGGTAGA CGGGCAGGTG CTCCGGCGGA AAGTGAGCAA ATGAAAGAGC TTATTCAAGC
TCTCGTTGAA TCTCAAGACT ATGTCGAGAT CTTTGGCTTC TACTCTCGTC AGTGTCCCAT
TCCAATTCTT TACTATGTGG CTTACAAACT TATACACTAG ATTTCGGGCA ATCGTATGCC
TCCGATTCCC TTTCAGCTGG GTCGTCCTAC TTCGCTGGCG AGATTAACTG TGTTCAGACA
GCAGCAAAGA TTGCTAGGAA CCTAGGTGCC AAAGGGAAAT GGACGTTGTC AGTCGGTGCT
ACACCAACAG CCCATGCAGC TGTCCAAGAA GCTGTCAAAG AGCACGGTCC TCTTGAAGGA
GAGCTTGAAC TGTAAACTCA GTCTTTGTTT CTGTGTGTGG ACTGCGCTGA CCCCTTGTCT
CTGATTAGAC ATGCAGGCTG CTACTGTATG TGTGACCTTC AGCAATGTGC CACTTCCCTC
GTCTCTTACT CAGACGTGGC GATTTCTGTT CTGGGTCGAG TCGTCTCCGT TTATCCCTTG
AGAAAGGAAG CGATGTGCGA TGTTGGTGCA CTTTCAGTAT CCAAAGATAC CGGCAGGTTC
ACTGGGTTCG GTCGAGTTGT GAAACCTGAC TACGCTACGG GCTGGGACCT TGGAAGGATC
AGTCAAGAGC ATGGGACACT TGTACACCGT CAGGGGGAGG ATATCAAAGA AGGAAACGAG
CTCAAGATTG GGAACTCTGT GCAAATCATC CCTCAACATG CGTGCTTAGT CTGTGCTTGC
TTCCCTTGGT TGTACGTGGT GGATGATGGG GGTAATGAAG TCGTGGATGT TTGGGTTCCT
TGGAAGGGAT GGTAGCTGAA GTACGGT
|
|---|
| Protein sequence | MSTFTPLSLY SLPSKSALVD EFVGQPLSAL RTPALIVDRK KFKDNCERVA SNAKERGMKF
RAHVKTHKTT EGTRMQVEAA GGVKATIAST MVEVWQIVEA GLVNEGLVND ILYSMPISAD
KLEDINSVQE IVGAQATIRL MVDHAEQIRI LQSFSQKIQR PARWSVFVKV DGGGKRAGAP
AESEQMKELI QALVESQDYV EIFGFYSHFG QSYASDSLSA GSSYFAGEIN CVQTAAKIAR
NLGAKGKWTL SVGATPTAHA AVQEAVKEHG PLEGELELHA GCYCMCDLQQ CATSLVSYSD
VAISVLGRVV SVYPLRKEAM CDVGALSVSK DTGRFTGFGR VVKPDYATGW DLGRISQEHG
TLVHRQGEDI KEGNELKIGN SVQIIPQHAC LVCACFPWLY VVDDGGNEVV DVWVPWKGW
|
|---|
| |