Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03480 |
Symbol | |
ID | 3259086 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 103670 |
End bp | 106972 |
Gene Length | 3303 bp |
Protein Length | 928 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258135 |
Product | ubiquitin-protein ligase, putative |
Protein accession | XP_572576 |
Protein GI | 58270840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.918815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAGACTTGG AGAGCGGGAA ATACCCTGCA ATCTAGACTT GCAATCACTA CCTATTCATC TTTCCGCCGG CGGTCCGCAC TCATTCGCCG CCGTACGATA TATAGACAAT TGTCTCCCAT TCATTTCCTC TATCAACGAC CTCAACATGC CCGTACGACC GTCAAGGAGC AACTCGGATT CTTCTATACC CTATGTGACA AACTCATCCC TGGCCTCGTC CTACCGCCCT ACATCGATCA GAGAAAGAGA AACATCACCC ATTAATACTT TCAACCAACT CTCTCTTGAA AGATCTCTCA CTCCACCTAA GGCCCCCCGA CTTGCACCTC AGGTGACCCA CGACCCCAAA TACACGCGTC ACAAAAGAAC CCAAGTGCTT AGAAATACGA GCGGAACACC GTCCGCGGCG AGCACGGACG ATGAAGATGA TCAGGATGAG CGTGGAAGGG GTGGTATAGA CGAGGAGGTG AAAAGCTGGT TGGAGCTACG TGATGGACAG GGATGGAAGA GAATCGGAAA ATACAAGAGT GTCAACAAAA GGGGTGAAAT CAAGAACGAT CTGACGAATC AACTGCCGCC CGAAATCCTG ATTCAGATAT TCCGGTACCT ACCTGGAAAC AAGGATCTCC TGTCTGTCCT TTTGGTCTCC CGTTTTTGGT GTCTTTGTGC CTTTTCATTA TTATGGTACA AACCCACTCT TCCAACAATC ACGCAACTCG CCTCGATTGT TCGTGTAATT CATTCTCCTA CCCGATCCCT ACCTTACGCC AACGCCATCA GACGGCTGCC TCTCATCCAA CTAGGTCCGA CTCTCACTGA CGAGCTATTC ACGTCTCTAT TAGTGTGTTC AAGATTGGAG AGGCTTAATA TCAGTGGTGC CGACAAGCTC ACTTCTGGGG CTTTGCGAAA TGTCATCGCC TGTATGCCGA ATCTGGTATC CTTGGATTTG ACAGGTGTCA TCAACACCGA TGATGCCGTC CTGGTGATTG TGGGTGAAAC CTGCCAGAAG CTGCAAGCTA TCAATCTGTC TGAATGTAGA TTGGTCGGGG ATGAGGGTGT CTTGGCACTG GCGAAGGAAA GCAGAGCGCT CCGCAGGGTG CGTACTTTCC CCTTGTTATC AGGAAATTGC TGACTCTGGC AATAGATCAA GTTTGAAAAA TGTCATCGAA TAACACAAAA ATCACTCATC CCTCTTATCC GCGCGTGCCC CCTTGTTTTG GAATATGACT TTCAAGATGT CATTTCTTTA TCCTCTTCTG TCCTTCACAC TGTCTTCCTG CACGCCTCTC ATCTCCGCGA AATACGCGTG AATGGCTGCG TCTCCCTCAA CGAAAATTGT ATACCCAATT TGCTCGATTT GAGCGAAATG CAAGACGACG GAGTTGCCAA AGTGTCAGAA GACGTGGGGA TCAAAATCGA ACCTGCGGAA GGCGTAACGA TGTGGCGACC GGTGACGACC ACTTTCGAGT ATTTGAGAGT GGTTGATATG ACTGGGTGTA CGGATCTGGG TGATAAAGCT GTTGATAACC TAATTACCAA TGCGCCAAAA TTGAGACAGT TGACGTTGAA CAAATGTCCC GCGTTGACAG ATAAGAGTTT GGAAAGTATT GGAAAGCTGG GGAAGCATTT ACATAACTTG CATTTGGGAC ATGTCAGCTT GTGAGTATTC AGCATTCAGC TTGGCGGGCG TGACAGTATA GACAAACTGA TCGAGATACA GGATCACCGA TGATGGGGTT ATCAACCTAG CGAGATCATG TACCAGACTG CGCTACCTTG ACTTGGCTTG TTGCACTTTG TTGACCGATG CTTGCGTGGC TGAGATTGGT GAGAACATGC CAAAGCTGAA GAGGTTTGGT CTGGTCAAGG TATATCTCAA TGAGTAAAGT CAGTGTCTGA AGTGCTGAAC TTTTTTCAAC AGGTCACCAA TATCACGGAC GAAGCGATAT ATTCTCTTGT CAGAAAGCAT ACTTCGTTGG AGCGGGTGCA TTTATCGTAC TGCGACCAGC TTAGCGTTAA GGCGATTGCA TACCTTCTCA ACAAACTTGC TCACATTAAG CACCTGAGTC TTACAGGTGT GAGCTCTTTC AAAGTCCCTG AACTCCAGGA ATTCTGCCGT CCACCCCCAG ATGTGAGTAT CCTTTAAAGA TATGCTTTCA TTATCAAGCT CATTTCCACG TTAGTTCTTC AACGATCATC AACGGGCTGC ATTCTGCGTC TTCTCCGGCT CAAGAGTTGT CGACCTTCGC GATTATCTCA ATAACCACTA TCTCCCCTCA ATGGAAGTTG ACACCTCTGA AGATTCGGGC CATGACGGTG CGGCTTCCAG TACCTCATCC CTGACCATCC CCAGGGCTGC ACCCACCCCC GATCATTCAT CAATTTCAAA CAGCGTTGCT CAACACAGCA ATCTTGTGTA TAGGCAGTCA TTGTCGAATC TGAATGATGT TTGGGAAGAC GCTCCATCCC CTATCTCTCC CACCCCTATG TCTCGACCTC AACCACCGCA CATTCTCACC GCATCGATCC AATATCAAAG CGTCCAACCT GGTGAAGGCG CTCCCTTCCC TATCGCGTCG ACGTCTACCT CACCTCCCAC TTTCACGTCT TCGTCATCTG CTAGGCTCAC TCCCAACCCG ACATCCGCCG CTCCATCATA TTTCAATATC AGCTCAAGTC CTAGCTTACA TAATCGCTTT GCCTATGGTG GTACTACCTT GCCTACCCAT TTGGATTACC TCGTACCCCC GTCTCAGGAA TCTTCTAGAT CGTCCAGCAT GAGCTCGAAC GGGGATAGGT TCCCGTTCAT TCCACATCAA GTTTTATCTG AGCGCAGCCG AGGCCCAGAT GCGCCGAGTA GACGGGATAG ACCGTCTGGA CCTAGAGTGC CGTCAGACTC GTATAATGTG TCTCCCTCAT ATGCTAATGA GTTCGCATCA TATTGGTCGA GGGAGGGCCG GCTACCACCA GCATCAGATG CAGAAGTCGG GATGGCGCGT ACGCATATTG CTGAAGAACC TATGACTCAA GTCCCGAATT TGTCTCATCG TCCAGGTGCA AATGGGTCAT CGTCATCGAG CGCGGGCGCT CAAAGGGAAG GAGGAAGGGG CTCAAGATGG TTACAGCGGT TCGGTAACGG ACGTTGATTG GCTGTCGTAA TCGTGTATGG GAGAGGAGCG GTTGAAACAT GTGTACAAAA CAAGAGATTT CGGTCATGTT GTTCAGTAAG GTACGATTCA TACATAGTAG CATAGCAGGA AAATTGTTGG ATAATTATGT TCTATGTAGA GTGATGATTC TCA
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Protein sequence | MPVRPSRSNS DSSIPYVTNS SLASSYRPTS IRERETSPIN TFNQLSLERS LTPPKAPRLA PQVTHDPKYT RHKRTQVLRN TSGTPSAAST DDEDDQDERG RGGIDEEVKS WLELRDGQGW KRIGKYKSVN KRGEIKNDLT NQLPPEILIQ IFRYLPGNKD LLSVLLVSRF WCLCAFSLLW YKPTLPTITQ LASIVRVIHS PTRSLPYANA IRRLPLIQLG PTLTDELFTS LLVCSRLERL NISGADKLTS GALRNVIACM PNLVSLDLTG VINTDDAVLV IVGETCQKLQ AINLSECRLV GDEGVLALAK ESRALRRIKF EKCHRITQKS LIPLIRACPL VLEYDFQDVI SLSSSVLHTV FLHASHLREI RVNGCVSLNE NCIPNLLDLS EMQDDGVAKV SEDVGIKIEP AEGVTMWRPV TTTFEYLRVV DMTGCTDLGD KAVDNLITNA PKLRQLTLNK CPALTDKSLE SIGKLGKHLH NLHLGHVSLI TDDGVINLAR SCTRLRYLDL ACCTLLTDAC VAEIGENMPK LKRFGLVKVT NITDEAIYSL VRKHTSLERV HLSYCDQLSV KAIAYLLNKL AHIKHLSLTG VSSFKVPELQ EFCRPPPDFF NDHQRAAFCV FSGSRVVDLR DYLNNHYLPS MEVDTSEDSG HDGAASSTSS LTIPRAAPTP DHSSISNSVA QHSNLVYRQS LSNLNDVWED APSPISPTPM SRPQPPHILT ASIQYQSVQP GEGAPFPIAS TSTSPPTFTS SSSARLTPNP TSAAPSYFNI SSSPSLHNRF AYGGTTLPTH LDYLVPPSQE SSRSSSMSSN GDRFPFIPHQ VLSERSRGPD APSRRDRPSG PRVPSDSYNV SPSYANEFAS YWSREGRLPP ASDAEVGMAR THIAEEPMTQ VPNLSHRPGA NGSSSSSAGA QREGGRGSRW LQRFGNGR
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