| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH03020 |
|---|
| Symbol | |
|---|
| ID | 3258995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | - |
|---|
| Start bp | 255808 |
|---|
| End bp | 257517 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 638258183 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_572472 |
|---|
| Protein GI | 58270632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.18451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTG CTGTCAAGAC CCATGCGCCG ACGCTTTGGA GGACTTGCAA ATGGGCCTAT
GGCGACTCGT CCGACCTTGT GTGTGGCGAC AAAATCCTTC AATCCTCTCA AGGTGTTCGA
CAGGGTGACC CCTTTGGCCC TCTCTTCTTC TCAATCACCC TCCGACCAAC CTTGAATGCC
CTCAGTCAAT CGCTAGGTCC GTCTACGCAA GCGCTCGCTT ATCTCGATGA CATCTACCTC
TTCTCAAACG ACTCGCAAGT CCTCAGCAAA ACTACCCAAT TCCTCGCCGA CAAGCAGCAC
ATCATCAAGC TCAACGAAAA GAAATGCAAG TTAATCAGCT TCGATGAGAT CAGGCAGGAT
GGCTTCAAGA TGCTAGGGAC GATGGTAGGA GGTAAGGAGA AGCGAGCGGA GTTTCTGGAA
GGCAGGATTC GGAAGGAAAT GGCAAAGGTG GGCAAGCTCA AGGATCTTCC ACATCAACAC
GCGCTCCTTC TATTACGCTT CTGCATTCAG CAAAATCTAC GACACCTGCA GAGAAGCCTG
CGCTCGGACG ACCTTGTAGA CCTATGGGAG AGGCTGGACA CGATGCTATG GGAGGAGGTG
AAAAGGATGA GGATGAGGCA GCGAGAGGAT ACAGCGGAAG AGGAGGCTCT CGGGAGATCG
TTGACGAAGC TACCAGCGCG ACTGGGCGGA CTAGGTCTAC TTTCCTTCAA AGATGTAGCC
CCCCTTGCTT ACCGCTCGGC AGCCGAGGCC TCCGACACTC TCCTCGATAA CCTAGGTCTC
CTTTCTTCGC CTGAGGAACC TCCAACTCCG GTCCCCCAAC GAACTCGATG CGCAGAACTC
TGGGAATCGC AACAGGAAGC CATCCTACAT AATCTCGGCG ACACTGAACG CAAGCGACTC
ACCGAGAATG CCTCCAGACT CGGCCGAAGT TGGTTATCAG TCATCCCTTA CCTTCAGCCC
CTGCGCCTTT CCAACGTCGA GATTGCCTCG GGTCTCCACG ACCGCACCCT GGTCGGCTCC
TCGATACCTG TCTGTCGCTT CTGTGGGTCG GACTCACCTT TGGGTCACGA CGAGCTTTGC
CGCGCCCGCA ACCCCTGGAC CCAGCGCCGG CACAATGCCA TCAACCGCGT CATCTATCAA
CACCTCAAAC AAATCCAAGG TGCCACGGTT GAGATTGAGC CCCACACGCT GTCGGGACAA
AGGAGAAACG ACCTTCGGGT CAGAGGTTCC AGCGCGCTGG CCTTCACTGA CTACGACCTG
AAGGTTTACT CCCTCGGGGA CCGAGACGCG AGGAGCACAG CCACCCCCAG CACCCCCAAC
AGCAAACTGG CCGAATTCTG CTTGGACCGG TGCGTGAACT GGCTCGACAA GGTGGGTCAG
GTCGTCTCCA AGAACGCTCC GAAAGTCACC GGTGGGGTCT TTAAACCGAT CATCCTTTCC
ACTGGTGGCC TGATGAGCAG GAGCACAGCA GACGAATGGA AGGAGTGGAG GGAGGCGATG
CCGGTGGGGG GGTTCGAGAA AATGGAGAAA CGGATTGGTG TCGAGTTAGT AAAGGCAAGG
GCGAGGACGC TGGTCTTATG AGGAAGAGGA GGTTGGATTA TTTTTTCTTT TCTTTAAAAA
GTTGTTTATT TAAGTAGTTT CTTTCATTCG GGTAACACAC ACGACAACCC AATAAATTAA
ACAACGAAAA AATGCAACCT CTATAACCCC
|
|---|
| Protein sequence | MAAAVKTHAP TLWRTCKWAY GDSSDLVCGD KILQSSQGVR QGDPFGPLFF SITLRPTLNA
LSQSLGPSTQ ALAYLDDIYL FSNDSQVLSK TTQFLADKQH IIKLNEKKCK LISFDEIRQD
GFKMLGTMVG GKEKRAEFLE GRIRKEMAKV GKLKDLPHQH ALLLLRFCIQ QNLRHLQRSL
RSDDLVDLWE RLDTMLWEEV KRMRMRQRED TAEEEALGRS LTKLPARLGG LGLLSFKDVA
PLAYRSAAEA SDTLLDNLGL LSSPEEPPTP VPQRTRCAEL WESQQEAILH NLGDTERKRL
TENASRLGRS WLSVIPYLQP LRLSNVEIAS GLHDRTLVGS SIPVCRFCGS DSPLGHDELC
RARNPWTQRR HNAINRVIYQ HLKQIQGATV EIEPHTLSGQ RRNDLRVRGS SALAFTDYDL
KVYSLGDRDA RSTATPSTPN SKLAEFCLDR CVNWLDKVGQ VVSKNAPKVT GGVFKPIILS
TGGLMSRSTA DEWKEWREAM PVGGFEKMEK RIGVELVKAR ARTLVL
|
|---|
| |