Gene CNH01080 details

Gene Information

• Locus tag: CNH01080
• ID: 3259265
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 879050
• End bp: 881249
• Gene Length: 2200 bp
• Protein Length: 511 aa
• GC content: 47%
• IMG OID: 638258375
• Product: lipid particle protein, putative
• Protein accession: XP_572299
• Protein GI: 58270286

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTTGTACTT ACAGGCAGGC ATAAAATGCA GGCCACCCAC CTCATAGTTC TAATACATGG 
CCTGTATGGT GACGTGCACA ACTTAGACGC CGTCAAATCA GAGCTTCTCG CACTCGCCGA 
CCCCGAAACA TCCAACATAT CTGACAAGGG CGCAAGTGGC GCAGAGAAAC ACAACAGATG 
TATACACAAT GAGAGACCAA AGAAAAGGAT GGAGACTGTC GTTTACCTGC CCAAGTCTAT 
AAAAGGGGCT CATACATGGG ATGGGATAGA CGTTTGTGCC CACCGAGTGG CTGAAGAGGT 
GCGTCCTTGA TCGCCTCTGT TCAATAGCTG CTGTTTAGTG AAGTCTGACC ATTGATTTAG 
CTGGACTATG AGATTGAGAG ACTTCAAGAT GAGGGTAAAG ACATAGTGGG ATTCAGCGTT 
GTGAGTAGTT GCAATATAGT TGAGAAAGAG ACCGCAATCG CTTACCTTGC CAATTCGCGT 
CGACAGATGG GATATTCTTT AGGAGGACGT GCGTACCACA AAGAATTCCT TGTTCACCAC 
CGGTGCTACC AGCGCTCACA TACCCTGTAG TGATTGGTAG ATACCTTATT GGCCTATTAC 
ATGCTCGACA GCCTTCTTTC TTCGCCCGGC ATCGACCAGT TTCATTCTCT ACAGCAGCAA 
CTCCCGTAAG CTTTTACCGC ACTAGCTTTT CTGCCGCTAA CAAGGACACC TCCAGCATCT 
GGGTGTACTC AAGTATGGTA CAAAAACCAA TACCTTTGTC CACAGTATAG GAAGGAAACT 
TTTTAGTCAT ACAGGAAGGC AATTGTACTG CATGGATCAT GAAACTGAAT GGGGAGGACG 
GAACCTGCTG GAAGTCATGG CCGATCCAGG TAGGTGCTAT AATTAGTCCA TTGCCAGATA 
GTCCCCAAGT CGCTCATTGT TCTTCCCCTA GATGGCATCT TCATCAATGC CCTTAGGCTA 
TTCCCAAGGT CCATGCTTGT CGCCAACGGG TACGCAGTAC TATACTCTTG ATCGAGACTG 
CAACATTCAC TGACATATGA TAAAACTGCC TGTAGTACTC GAGATCTAAC AGTCCCTTAT 
CCGACAGCTT CTATATCACC AGTTGACCCT TTCGACGACT CGACATACCT AGACATTGAA 
ATTGATGAGA ACAACATCAT CCAGTCATAC CGTCACATCC CTCTTGATGA CGACTCGGTT 
TCAAACTTTG GAAGTATCTC CACTAGTACT ACGCAACGAA TAGAAAAAGA TGAAGAAGAA 
GTGGAGGTAC TTGTTACTAC TATATATAAA AAACCTGGAC GCATCATGAA GGTCAAGAAA 
AGATCGCCCC CACCTTTTCC GCCTGTTCTT ATCTTGCCTT TGAGATGGCC TTTCAACTAT 
GTGAATCACC CTGCTGCCAT CGTGGAATAT TTCTGACTCT CTTTCTCCCT CATAGAGTTT 
ACTCCCTTTT ATCCCTGTCT TGTTACCGTT ATTCATTCTG TACATGTGAA TACCCTCTCT 
ATATGTTCAG TGAAGTAAGG GGAATAGTGC TGATTGTCTT CAGGACCATT ATGATCACGT 
GGATCACCTT CCATTCGTGA GAATTATCTG TGGTGGCCGT TTTGCCATTA CTAATTTCCT 
TGCAGCCGGC GACGGGTGCA GAGTTTACGA CACAATCAGA TTGAACGCCA ACCTCTTCTT 
TCCTCATCTT CTTCAATGTC ATCCACCCCT AGCTCCTCTT TATCCGACAT GACTTCCTCT 
GTGAAGCAGA CTCTATACGA GCCGATCAAG GCGTTGGAAG ATGGCACTAG TACCCCTCCC 
ATGGCTGATC CTCTACCTAC CGGCTCAGCA CCGCAACCGT TACTCACCCC TCATCAGAAA 
ATGATGGTGA AGGCTTTGAA CGAGGCGATG CCGAATGCGA AGAGGGTGAT CGCCTGGTTC 
CCTTGGGCGT ATAATGCCCA TGCCATGCTG ATCTGTCGGT ACGTAAAGGC CGAATCAAAT 
GAGTATGCAA AGCTGACGTG GAGTGTATGG TAGATCGATG GCCCGCTTTC CATGGCAGAA 
GGATGGGCTA GGGGTGGTGC AAGCTTGGGC AAAGTTTGCG TTTGAAGCAG GAGAGGCAGA 
ATGTCATGCG AAAGCTACTG GGGCTGTTGC TCATGGTAAC ACATGATAGA TCGTTCAGAT 
TGTTGCGCAT CATCTATAGA GCTAGAAAGA TCTTCAATCA 

 

Protein sequence

MQATHLIVLI HGLYGDVHNL DAVKSELLAL ADPETSNISD KGASGAEKHN RCIHNERPKK 
RMETVVYLPK SIKGAHTWDG IDVCAHRVAE ELDYEIERLQ DEGKDIVGFS VMGYSLGGLI 
GRYLIGLLHA RQPSFFARHR PVSFSTAATP HLGVLKYGTK TNTFVHSIGR KLFSHTGRQL 
YCMDHETEWG GRNLLEVMAD PDGIFINALR LFPRSMLVAN GTRDLTVPYP TASISPVDPF 
DDSTYLDIEI DENNIIQSYR HIPLDDDSVS NFGSISTSTT QRIEKDEEEV EVLVTTIYKK 
PGRIMKVKKR SPPPFPPVLI LPLRWPFNYS LLPFIPVLLP LFILYMTIMI TWITFHSRRR 
VQSLRHNQIE RQPLLSSSSS MSSTPSSSLS DMTSSVKQTL YEPIKALEDG TSTPPMADPL 
PTGSAPQPLL TPHQKMMVKA LNEAMPNAKR VIAWFPWAYN AHAMLICRSM ARFPWQKDGL 
GVVQAWAKFA FEAGEAECHA KATGAVAHGN T