| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00940 |
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| Symbol | |
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| ID | 3259280 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 916243 |
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| End bp | 919215 |
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| Gene Length | 2973 bp |
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| Protein Length | 813 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638258388 |
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| Product | transcription initiation factor tfiid 90 kda subunit (tafii-90), putative |
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| Protein accession | XP_572288 |
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| Protein GI | 58270264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.152566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAAAGATGTC GCAGTCCCCA GACCCATCCT CCGTCAAGGG TGGCGCCCAA GGGCAGCTAG
CTCCCAAATC ATCCACACCC ACCCAACAAC CTCCTCTCAC AGACTCAAAG CTCCTCCGCC
AATTCGTCAT GGAATACCTC CAATCTCATG GTTTCGACAA GGCTCTCGAA AAGCTCACTG
AACAGGTGGA AGATGCGAAT TTGAGTACAA CTGCGAGCGC GGCTGTCTTG GGTGATGCAG
ATGTCTCCAA AGAAGTTGCG GATGGGAAGG CAACGGCAGG TGAACAAGGC GGAGAAAAAG
AAGCCATTTT CCGAGCTCCC GGTCCTGTAC CGTTAGAATC CAACATCAAA CGTAACATTC
CCCAGGCCCA AGCTGTTTCT GCATCTACGA TGTCTGATCG GATTACTCCC GAATTCGAGG
CCCAAGCAAA ATACATTATT GAGCAGCTTC AGAAAAAGGT CGAGGCCGTC CAAGAGGAGG
GTGGAGATGA GAAGGAGAAG GAGCTGAGAG ATGGGATACC GGTTGATGGG GCGATGGTGG
ATGTCAGTGA CAAAGTGGCT GGGTATGAGG CTTATAGGAG ATGGGTAGAT GGAGGATTGG
ATGTTTGGAA GGTGGGTCTT AAGCAATCTA TACCGGGCCT GGAGCAAAGT GAACTGACAA
TGGGATAGGC TGAACTGGAC AATCTGTCAT TTCCGCTTTT CGTCCTCTCG TTTTTGGACA
TGATACATTC TGGTTTCCTC AAGACAGGTG TGTAGTCAAT TGCCTTTGTT CTTTCTGACA
CCTTGCCTAG CTCGTGAATT CTTCGAAAAA CACAGTGCCC ATCATCGCGA ACTTCATTCC
CAGGATCTTT CCTCATTATC ATCAGTATCA ACTGAAGAAC ACATAAAGCG AAATCCTTTC
TGTGCTAGAA TACTGCGAGT GCTATATTCA CTCTGGGAAA AATGTGTTCA TTGCTGACTC
CACGTAGGAG CGAAAAATAC GTTGTTCCTT TATCTCGCAA CGCTTATGAT TTACTTTTAC
AATGGCTATC CGGAGCGAGC TTGGATGATG AATGGGAAGC TGGTCTCCAC AGCGCCCCGG
GCAGACAAAA AGAGGCAATC AAGTTGATAG TGGTTAGCCA TTTGAACATA ACTGGCAAGT
CAATTTCTTT TTCCATACAG GCCCCCGTAC TAACCAGAGC AATAGTTACC AACGATTCTG
CGCCTCTCGA TAAAGTCACA ATAGCCTCTA AATCCGGTCT TATCTCATCT TCTCTCCCAC
CCAACACCAA CATTGATGCT TTCAACACTG CCACCCAACT GAAGCTCGGT CCACCGCCAA
TGACAGAAAA GCTAAAAGAG CAAGTTACGA GGACGCTGCA GGATGAAGGG GAGGCACAAG
GTGCCAACGG CGACGCAAAC GGCGATATTG ACATGACTTC ACCCTTCCCG ACTAACGAAC
CTGTTATCAA ACTCGAGCCC GAGACTGAAC GTGACCCCTC TGTGATCAGC CCTGACGAAT
CCGAAACGCT GCCGCCTATC CCTGCTGTCT TTCGCATAGC AGACCTCAAG CGGGAAGTGG
AAGCGATCAA AGATAAACGC AAGATGATCC GCCTTGGTCC TTCTGGATCA GGAGCATCAG
CTGGATCCGG CGTCTTACCG AGTGTGGTAG CGTTTACGCT GTTTGACCAT GGTGAAAATG
CCAACTCGGT AGAATTCTCG AGGGATAGCA GTTTGATGGC TGTTGGGAGC TCGGAGAGCT
GTGTGAGACT TTGGAGTTTG AAAGGAGACA AGTTGAAGAA GAAGAAGGTG GATATAGAAG
GGAACTTGGT GGAAGACGAA GGGTTGCCGA TGAGGAAACT CGTTGGCCAT TCTGGGCCAG
TCTATTCCCT TTCCTTTGAT CCCTTGTATG GCTCTGCTGG TCCACCTTCC ACGCTTTTAT
CTTCTTCACA AGATGGGTCT ATCCGACTTT GGTCCATGGA TACGTACTCA AACTTGGTAG
TTTACAGAGG GCACGGTAAA GATCCTGTTT GGGATGTGGA GTGGGGTCCT ATGGGCGTGT
ATTTTGCGAG CGCCAGTAGG GATCGGACGG CGAGGTTATG GAGTTCAGAC AGGGTTGCGC
CGTTGAGAAT GTACACTGGG CATTTATCAG ACGTGAACGT GAGTTTTATT ATCTTTCATA
TAAAACATTG GTAAAACGGG AGGGGGGCTG ATTGAGAGAT GCAACTCAGT GCGTCAAATT
CCATCCCAAT TCGCTTTACC TTGCCACAGC GTCCACCGAC ACCTCTTGTC GATTATGGGA
CGTCCAACGC GGTGCATGCG TCCGTCTCTT CCTCGGACAT ACCGATAGCG TCACAACGCT
CTCCATTTCC CCGGACGGCA AGACGCTCGC GTCGGCAGGG CTGGACTCGT CCATCTGGCT
CTGGGACTTG GGCTCCGCCC GACCGATCAA GAAGATGGAG GGTCATACTG GCGCGGTGAC
GAGTCTAACT TTCTCCGCTG AGAGTTCCGT CCTGGTTTCC GGGGGTCTGG ATGGGACGGT
GAGGTGTTGG GATGTGAAGA GTGCAGGAGG GGAGAGGAGT GTGGATGGGA TGTTTGGTGG
TGGGGATGCG AGAAGAGGCG AGGAGAGGGG TGGGTTACCG ATGAATCCGG GTGATGTTTG
GGATACTGCG CCTCATACGT GAGTGTTTTT ATTCTTTTCT TTTCTTTTCT TTTCCTATCC
TCTTTTCTCT TGCCTGTACC ATGTGCTGAT AGGGTCGTTT TAGACCGGAC CTACTCGCAA
CGTGGCCAAC AAAACGAACG CCCATTCTCA AAACACATTA TACCCCTCGA AATTTGTGCA
TGGTAGCCGG GAGTTTTGTT CCACCTAGTA ACCACAGGAC GAGCGGCGGG GAAAAGTAGG
AAATAGGGGA TGTGAGGGAA GAAGGAAATG AGGGTGGGCA GGAAGGGGCG GGTTTTCTGG
TAACTGTTGT AGGAACAAAG AGTTTTATAT ATG
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| Protein sequence | MSQSPDPSSV KGGAQGQLAP KSSTPTQQPP LTDSKLLRQF VMEYLQSHGF DKALEKLTEQ
VEDANLSTTA SAAVLGDADV SKEVADGKAT AGEQGGEKEA IFRAPGPVPL ESNIKRNIPQ
AQAVSASTMS DRITPEFEAQ AKYIIEQLQK KVEAVQEEGG DEKEKELRDG IPVDGAMVDV
SDKVAGYEAY RRWVDGGLDV WKAELDNLSF PLFVLSFLDM IHSGFLKTAR EFFEKHSAHH
RELHSQDLSS LSSVSTEEHI KRNPFCARIL SEKYVVPLSR NAYDLLLQWL SGASLDDEWE
AVTNDSAPLD KVTIASKSGL ISSSLPPNTN IDAFNTATQL KLGPPPMTEK LKEQVTRTLQ
DEGEAQGANG DANGDIDMTS PFPTNEPVIK LEPETERDPS VISPDESETL PPIPAVFRIA
DLKREVEAIK DKRKMIRLGP SGSGASAGSG VLPSVVAFTL FDHGENANSV EFSRDSSLMA
VGSSESCVRL WSLKGDKLKK KKVDIEGNLV EDEGLPMRKL VGHSGPVYSL SFDPLYGSAG
PPSTLLSSSQ DGSIRLWSMD TYSNLVVYRG HGKDPVWDVE WGPMGVYFAS ASRDRTARLW
SSDRVAPLRM YTGHLSDVNC VKFHPNSLYL ATASTDTSCR LWDVQRGACV RLFLGHTDSV
TTLSISPDGK TLASAGLDSS IWLWDLGSAR PIKKMEGHTG AVTSLTFSAE SSVLVSGGLD
GTVRCWDVKS AGGERSVDGM FGGGDARRGE ERGGLPMNPG DVWDTAPHTP DLLATWPTKR
TPILKTHYTP RNLCMVAGSF VPPSNHRTSG GEK
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