Gene CNH00790 details

Gene Information

• Locus tag: CNH00790
• ID: 3259023
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 963711
• End bp: 965921
• Gene Length: 2211 bp
• Protein Length: 590 aa
• GC content: 51%
• IMG OID: 638258403
• Product: Endoglucanase E-4 precursor, putative
• Protein accession: XP_572272
• Protein GI: 58270232

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.323744
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCTTACTTA CTTATTTATC GCCTTCCACT CTTTCTCCCT CTTCCGTCTC TCTCTTCCTT 
CTCGGCTGAT ATTTCAGCCA TGCTCATCCC CTTCCTTGCC CTCGCTTCTC TGTCCCGAAT 
AACCACAGCC CAGCTCACAC CGTCTCCCAC TTATTCTCCT CCAACCTCCT CTGCAGGACT 
CACAGCCTCC AGCGAAACAC CCAACACACA ATGGTCCAAT ATCCTTGGTA ACTCCCTTTG 
GTTCTACGAT GCCCAAAGGT CAGGTAGATT AGATGAAGGA ACATATGGGA ACAGAGTAGA 
CTGGAGGAAT GATAGCGCTT TAGAAGATGG GAGTGATTGG GGTTTGGACC TTGTCGGCGG 
ATGGTATGAT GCGGGTGACT ACATCAAGGC GACATTTCCT TTGGTAAATC TGTTCTATTT 
ATATTCCCCA TGACCTAGAC TAACCAGAAT AGAGTTTTAC CTTATTTGCG CTCTCCTGGG 
GGGCGTTGAC GCATGGCCAA GGATATGGCC TTGCCAACCA AACAGCCTAT CTCGATGGGA 
CCTTGCGATG GGGTTTTGAT TGGCTTATGA AGGTAAGGAA AGGCCTACAT GTGGGATTGT 
GCTATAGAAC TGATGAGAGC AGGCACACCC ATCGGATGAT GTGCTGTTTA TCCAAGTTGG 
TTCTGGGGAT GTCGACAACA ATTACTGGCA AGTCCCTTCA CTTGTACGCA GCCCAAAACA 
GATCTAACAA TCACTCAGGG GCGGGGACCA GGACATTCCA AGTCCTCGCC CGGGGTACCC 
AATCAACTCT TCTTACCCTG GTACAGATGG CTGGGCCGCT GCCTCTGCCG CCTTTTCACT 
AGGTTCCCTC CTTTACACAC CAGGCGTCTC GTACAGACCC ACTTCATCGT CCTCTCCTCC 
AACCTCACCT TCATTGGAAA ACTCCACTTA TGCGTCTCAG CTGTTGGCAC ACGCTGAGTC 
GCTTTACTCT GTCGCCAACT CTACCACCCC TCGACAAACT TACTACGCGG CTTTAGGTGA 
TGAAGTTGCC GCTTACGCCT CTTCCGACTG GCGAGATAAC CTCTGTGCAT CTGCTCTGGC 
TCTGGCACTG GCGACAAACA ACTCTGCGTA CTACGCCGAT GCATACAACT ATTATGTCCA 
ATATGGGCTG TCAGGCACAC ATGAAGTTTG GAACTGGGAT TCGTCACAGC CGGCAATTTA 
TGTCATGTTT GCGGAAATTG CGAGCGCAAA GCCCGAGTTA GCGCAAGGAG CTGGACTCGA 
CGTGAACTTG ACTGGATGGC AGACTGAAGT CGAGAACTAC TTTGATGGGC TTATCAAAGA 
GGATTTCAGT AATTCTTACT TGACCGAAGG TGAGCAAAAT CCTTCCAAAA AGACCACTAG 
CTTACGGGAG TAGGGGGATT ACTCTATTGG GATGGCGACT CTGACGAGGC GTCCTTGAAC 
CCTGCCATGG CTGCCGCTAT GCTCATGTTC AAGTACGCAC CCATGGCCTC TTCAACCGAC 
AAGACCAACT CTTACAATTC ATTCGCTCAA TCCCAACTCA ACTACCTGCT CGGCTCCAAC 
CCCATGTCAG TCCCTTACAT CGTTGGGCAA CACCCGAATT CCCCATCCAA CCCCCACTCT 
GCCCCCGCTT CTGGTGGCTT CAACATAAAT AATATCCGTG ACGACCCTCC CACCGAGGCG 
CACGTGTTAT ATGGTGCGGT GGTGGGTGGA CCGTTGAGCA GTGATCAATT TTGGGATTGG 
AGAGACGATT GGGTGCAGAC GGAGATAGCA TTGGATTATA ACGCGATGAT TCCAACTCTC 
GCCTCTATGC AGGTACGTCT TTGACTAGCT TCGCCTGGCA TTTAAACGAG GGCTTGAGAC 
TGACTCTATC TGTAGCTTAT GAACAACACT GCCGATCCAC CTTATGTCGA CATCGCTGCA 
GGCACATACT CCATCCCCTC TGGCCAACCT TGTGATGCAG CTCTTCCATG CCGCGGTGGC 
GGCGGTCTTA GCGGTGGTGA GATTGCAGGG ATTGTTGTGG GTGTTATTGT GGGTGTGGTC 
TTGTTGGTGA TTGTGGGCGT TTGGTGGTGG TGGAGGAAGA GGGGAAAGAG ATGGGGTAGT 
AAGTGGTAAG TAGGAAGCGA GGATTGCGGC GCAGTTTGGT GGACATTTGG TTTTTTGTTG 
TGTCATCATA ATGGATTTAT AAAGTCAAGC CTATGTATCC GTGTTTTTGT A 

 

Protein sequence

MLIPFLALAS LSRITTAQLT PSPTYSPPTS SAGLTASSET PNTQWSNILG NSLWFYDAQR 
SGRLDEGTYG NRVDWRNDSA LEDGSDWGLD LVGGWYDAGD YIKATFPLSF TLFALSWGAL 
THGQGYGLAN QTAYLDGTLR WGFDWLMKAH PSDDVLFIQV GSGDVDNNYW GGDQDIPSPR 
PGYPINSSYP GTDGWAAASA AFSLGSLLYT PGVSYRPTSS SSPPTSPSLE NSTYASQLLA 
HAESLYSVAN STTPRQTYYA ALGDEVAAYA SSDWRDNLCA SALALALATN NSAYYADAYN 
YYVQYGLSGT HEVWNWDSSQ PAIYVMFAEI ASAKPELAQG AGLDVNLTGW QTEVENYFDG 
LIKEDFSNSY LTEGGLLYWD GDSDEASLNP AMAAAMLMFK YAPMASSTDK TNSYNSFAQS 
QLNYLLGSNP MSVPYIVGQH PNSPSNPHSA PASGGFNINN IRDDPPTEAH VLYGAVVGGP 
LSSDQFWDWR DDWVQTEIAL DYNAMIPTLA SMQLMNNTAD PPYVDIAAGT YSIPSGQPCD 
AALPCRGGGG LSGGEIAGIV VGVIVGVVLL VIVGVWWWWR KRGKRWGSKW