Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH00540 |
Symbol | |
ID | 3259081 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | + |
Start bp | 1029135 |
End bp | 1031607 |
Gene Length | 2473 bp |
Protein Length | 550 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258431 |
Product | galactose transporter, putative |
Protein accession | XP_572246 |
Protein GI | 58270180 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGCTCGAGAG CAGCTTCTTC CCCATTCTTT CAACCATCAC CTAACAAATA CACTCCTGGC ATTACTCTAT CTCAACGATA AAGTCTCAAG CAGTTTAGCT CAGAGTACTT TTTATACGCA CAAAACCTAA TACTACTTTC CACCACAACA CAAGTAACAA CAATGGGTGG TGGTGCTCCT GCCGGCGGTG ACTTTGAGGC TCTCCTCACT CAACGTCAGA ACGAAGGCTG GCGAGGTCTT TTCAAGAACG GCCGAGCTCT CGGTTTGGCA TGTTTCGCTT CTCTTGGTGG TGTCCTCTAT GGCTACAACC AGGTATATTA TCCTGTGCAT TTTTTAAATG CCTGCCATTT GCTTATGTCC TGCGTTAGGG TGTTTTCGGT CAAGTCCAAG TTATGTACAA TTTTGAGCAG CGATACACTG CTACTGTAAG ACTTGGCAAG CTTCTTCCTC ACCACATTTG CTAACACATC CTTCTACAGT TGACAAACCC CGACACCAAA GGTCTCTTGA CTTCTATTCT TGAACTTGCT GCTTTTGTCG GTGCCCTCAT GGCCGGTCCT TTGTCTGACA GATATTCCCG AAAGGTGAGC GAATTTTTCC CTCCCTCCTT TTCGATGGCT AATGTTTCAT CCAGTACTCC ATTTCCGCTT GGTGTGTCGT CTTCATGATG GGTACTGCCA TTCAAACCGG TGCCAACTCC AACGTCGCGT GCATTTACGG TAAGTAAATT GTCCGCATTT ACTCCGGGGA TGACGTCAAG CTCACACTTC AGATCAGCTG GTCGATGGTT TGCCGGTATG GGTGTCGGTG CTCTTTCTAT GCTTGTTCCT ATGTTCAACG CCGAGTTGGC TCCTCCCGGT ATCCGAGGTT CTTTGGTCGC TCTTCAACAA CTGGCCATTA CATTCGGTAT CCTCATTTCT TACTGGATTG GCTACGGTAC CAACTGTGAG TGCCTCGTGT GATCTAGCGT GAGTGCTAGC TGATGCAGGA ATTAGATATT GGCGGTACAG GTGCCGGTCA GACTACCGCC GCTTGGCGAA TTCCCCTTGG TCTCCAGCTT ATCCCTGGCG TGGTTCTTTG TGTCGGTGCT TGCTTCCTTC CCTTCTCCCC CCGATGGCTC ATGCTTAGGG GTAAGTACAC GCCTCGTGGT TTCATCCGAA ATCCTCATAT CGCTCATAAT CTTATCAGGT CGTGAGGAGG AATGTCTTAC CAACTTGGCT AGGCTCCGAA GCTCTACCGA GGAAGCCCCC GAAATCCAAT ACGAGTTCCG TGCTCTTCAG GCTGAGCGTC TTGTAGAGCG TGAGGCCGCT AAGGAGCGAT ATGGTCAGGA GGACGTCAAC TTCCGAGTCA CCATGCTTGA GTACAAGAGG TTGTTCACCA CCAGGCCCCT TCTTCACCGA CTCATGCTTG GTGCTGGCGC CCAGGCTTTG CAACAATGGA CGGGTATCAA CGCCATTATC TATTACGCTC CCACCATCTT TGCGCAGATA GGTCTTACTG GTAGCGGTGC TAGTGGTACT ATCAGTCTTT TGGCCACAGG TATCGTCGGC GTCGTCAATT TCGTCTTCAC TATTCCTGCC GTCCTTTTCG TCGATAACGT AAGTACCCTT CCTTCAGTGA CTTCAACTTC CGCAGTACCT GACAGGTTGG TGTAGTTTGG TCGAAGGCCT CTCCTTGCCT GGGGCGAAGC CAACATGGCC ATTTCTCACG CTATTATTGC CGCTATCGTT GCCGAATTCG GTGACAGCTT TGATAGCAAC AAGAAGGCTG GTAACGCCGC TGTTTTCTTC GTAAGTCACT GGATATTATC AGTGCACCAC TGAGCAGTCA TTAACTTTTA TCTTCTAGAT CTATTGGTAC ATTGCCAACT TCGCTGTCAC CTGGGGTCCC TTGGCTTGGG TTGTTTCCGC TGAAGTCTTC CCTCTCGACA TGCGTGCTAA GGGTATGAGT ATTTCTTCCG GTGTGAACTG GCTTGTAAGT CTTCTTCAAC GAGTATCCTT TCGAGTCGCG TTAATCATCG CCGTAGATGA ACTTCACTGT CGCTATGGTC ACCCCTCACA TGATCGATAA CATTGGCTAC AAGACCTACA TCGTCTTCAT GTGCTTCTGT GTCGTTGGCT TCCTGTATTC CATCTTCATC CTTCCAGAAC TTAAGGGTCT CTCTCTCGAA GAGGTCGACA GGGTCTTCCA CGACGAGTCC GGTGCCGAGG ACCGAGCACG ACGAGAGCGT GTTGCTGCCC AGATCGGTTT GGACAAGGTT GCCGAGCAGA TTCAGCACAA GGAGAAGGTC AACGATTCCG AAGCTTAAGA AGAAGTGCTG TTCTATGTCG TCTCCCCTTT TTTCAATTTT CCATTCGCTG TTATAATAGC AATTAATGTA GTCGGGCAAG AAGGTAGATT CTTTCGTACT GTACCGTTAG CACCCACGTT TTCATTATCA CCTCACTCAG TGATGCATCG GTGTTTGCAC ATT
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Protein sequence | MGGGAPAGGD FEALLTQRQN EGWRGLFKNG RALGLACFAS LGGVLYGYNQ GVFGQVQVMY NFEQRYTATL TNPDTKGLLT SILELAAFVG ALMAGPLSDR YSRKYSISAW CVVFMMGTAI QTGANSNVAC IYAGRWFAGM GVGALSMLVP MFNAELAPPG IRGSLVALQQ LAITFGILIS YWIGYGTNYI GGTGAGQTTA AWRIPLGLQL IPGVVLCVGA CFLPFSPRWL MLRGREEECL TNLARLRSST EEAPEIQYEF RALQAERLVE REAAKERYGQ EDVNFRVTML EYKRLFTTRP LLHRLMLGAG AQALQQWTGI NAIIYYAPTI FAQIGLTGSG ASGTISLLAT GIVGVVNFVF TIPAVLFVDN FGRRPLLAWG EANMAISHAI IAAIVAEFGD SFDSNKKAGN AAVFFIYWYI ANFAVTWGPL AWVVSAEVFP LDMRAKGMSI SSGVNWLMNF TVAMVTPHMI DNIGYKTYIV FMCFCVVGFL YSIFILPELK GLSLEEVDRV FHDESGAEDR ARRERVAAQI GLDKVAEQIQ HKEKVNDSEA
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