Gene CNH00090 details

Gene Information

• Locus tag: CNH00090
• ID: 3259055
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: -
• Start bp: 1162024
• End bp: 1167443
• Gene Length: 5420 bp
• Protein Length: 1661 aa
• GC content: 61%
• IMG OID: 638258476
• Product: hypothetical protein
• Protein accession: XP_572203
• Protein GI: 58270094

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0565076
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAGGG ACGAGGCGCA TGGCGAGGAG AATGGGGGTG ACAAAGACGA TGACCGCCAG 
CGTCTCGTAC CAAGCCCGAC CGCCGACACC GACGCCGACG CCCACGCCGC GCCCTCGCGC 
GCACCTTCTT CCGCATCCGT CATCTCCACC TCCTTTTCCG CTTCCACGCA CCACACATCG 
TCAAGCAAGG TGGGCAGGGT GAAGAGCAGC GAAGTCTTGC GCCGTCGCGG GGCGGCTAAA 
GAAGGGGGCA AGTATATGCA GCTAGAGGGT GGAGATGGAG AGAGAGAAGA CGAAGAGATT 
GTCCGTTCGC CGTTATCAGG CAAAGATGGA TATCGAGAAC AGCGGTAGGT AATTCATCTT 
CCATCAAGAG GTGCTGTTTT TAATTTAATA CGCAGACTCC CAAGCTATCA CCACCAGCAC 
CCTTCTGTGC ATGCCCCTGC ACCCGTGTTT GCACCACCCG CGGCGTACGC ATTTCCTTAC 
CCGCCTCGAC GGACAGGGCA GCCTGAAACG TTCCAAGCGA CGGACCTGCC GCGCTCGGCG 
TCGCAGCCTA TGCACCTCTA CTCTGTGCCC GCGTTCTTTG ACCCGACGTA CACCACCGCA 
CGCCCGGCGG GGGACGACTC CCAAGACGAC GAGCTGCGGT CGCGGCCATG GAGCGAAAGC 
ACACTGGACG GTGTGCGCGT GGGGACCGCG AAGCGGCGGG GGCGGTCGCT GTCTGACGGG 
GCGGAGCTGC TCGCGCGACA GGGCACGCTG CTGGACCCGT CGTGCGGCAC GCCGCGGTCG 
TCGGCGGAGC TGGGGATCCT GCTGGGCGGT GCGCGGTCGC GGCGGCTGTC GCGGGACCGG 
CTGGCGGCGG CGGGGGCCGG GGGCGGGGTG CGGCTGGAGG CGAGCAAGAA GGGGCGTGCG 
CGGGTGGAGG TGGACGTGGT GGTGGAGCGG GAGTGTGTGG TGGAGGGGGG GGACGTGCGG 
GGGCGGGTGG AGGTGCGGGT GCGTGGGGGG CGGCGGGCTC CGCGTGGGCG GCGGCAAGGT 
GCGCGTGGTG GGGTTTGAAG GTGAGTGCGC CCGGGTGTCC CGATCTGACG ACCGCAGAGC 
TGTCCTCCGC CCGGCACATG TTCTACCACC ACGCGCACGC CCTCGCGCTC GGCCCCCCCT 
CCCCCCTCGC GGCGTCCCCC GCCGACGCCG ACGGCTTCTG CCTCGCCGCC CCGGGCACAC 
ACAGCATCCC CTTCCGCTTC CCCCTCCCCC CGGCCGCCGG CGCCAAGGGC ACATTCACCC 
CCCCCCGCCG CGGGGGCCCC ACCGTGCGCT ATGTCCTCGT CGCCTCCCTC AAGACGCACG 
TCCCCCCCAC CGGCAAGCGC TCCATCGCCC ACTTCTACCG CCCCATCGTC CTCCTCCCCG 
CCCTCGACCC CGCCCGCGTC CTCGCCCCCG CCGCCGAGCC CCTCCAGGCG TGTGCCGAGG 
ACGCCCTCGG GTGGAGTCTC AAGGGCGACA GGGGCCGCGT CGCGCTGCAC GTCGCGCTCG 
GCAGGGCCAC CTGGGTCAGC GGCCAGCGGC TGTGGTGCCA GGTCGGCATA CGCAACGGCA 
GTCTCCGCAA GGTATGTCCT CTCCGTGACG GCGCAACTGA CGCAGCGCAG ATCAAAAACC 
TCAGCCTCGC ACTCCTCCAA GACGTCCGCA CCTTTGGCCC CAAGTCTGCG ACGGACCAGC 
CAGTAGAGAC GCACAGGAAA AAAGTGGCTG AAGAAGCGGT CGAGGGCGAC TTCACGACCC 
ATGGCGCAGG ACGGGTCACC GGCAAAGGGT GGTGGACCGG TGTCGAGCCG GGCGAAAGCG 
GCCATTGGGA TATGAGTATC CAAGTTCCTG TACGCTGATT GTTTCTCTTC CCATATGCAA 
CTGACCCGCC ATCTAGACCG GATTGCTATC CATCCGCCGG ACCAAACTCG TCGACGTCTC 
CTACACACTC CGCGTCACGC TCAACAACTC CATCTACGTC GATCTCCCGG TGACGCTCAT 
CAGCTTCTTG TCGATTGATC CTCCGCCCAT GCCTGGCGGA GCGACCAGGG GTGTCCCGAT 
GGCAGAGTGG GCTGCAGTCC GGGGTACACC GGTGCCGGCG CCGCATGAAG AAGAGGGAAA 
AAGTCGGGTG CGTATCCACA ATTCTTTCAT TGTCCCCAGG CTCACCTCCA TCGACAGCAC 
ACCCAGGAGA CACCTATCCC AGCCGCACGA GCAAGCAGTA CAACCCTCCA TCCCGACCCA 
TCTCAACCGC TCGTCCAGCC GCCTCCACCT CTTCCCGCCT TTGAATCCCA CTCCCAATGC 
GAGAGCGCGA CCAGCACATA CACCTCGCCC TCCAATGCCG CCTCTGCCAC TTCCTTGCCC 
AACCTCTTTA CCATCCCCGC CTACTCCCGC GCCCAGGCCC ACGCCCAAGC CCAATCAAGC 
TCCCCACACC TCTCTGCCTT CTCCGGCTTC TCCCCCCGCC CGGAAACCTA CGCTTACCCG 
GAAGACGACC CGCAGCTCGA CATTGACGAC GAGAACCAGG ACACCATCTC CCGCGCACAA 
AATCGCGCAA AGGGCAGACA GCGGAGTCTG ATGATCATCC GCGCGGAGAT GGAGAGGGAC 
GACGAGGAGC GGAAAATGTC TTTTGCTCAG GGATGGGATG CGGATGCCCG GGGGGGTGCC 
CAAACCCAGG AGGGGACGAT GGAGGGGACG TACGAAACAG ACGTCGACGT CGAGCGGACG 
CCCATGCCGG AACCGTCTGC CTACTTGCCA AGGATGGACA CTGCGCCCGA GAGGGACATG 
CCGGACGTGG AGAGGGGTAT CGAAGAGCTT TTGGAGATGG AGGAAGAAGG GTGGGATTTC 
GATTCGGTTG ATGCACACCC TCCGTCTCAC CAACCCTACC AGCCTTACAC CGACCAGAAC 
ACCGAGATGG ATCAAAACGT TGACCCCGAG CACCCACACC AGCACCAGCA AGACTATGGG 
CAGGGACAAG AGCTGGAACT GCTGGACGAA GAGAGACGCG AAATAGAACG AGTCATCCCC 
CACCCTTCCC ACGAGCTCAA AGCGGACGAC GAACAGGACG AGCCCGACGA GCCCGACAGA 
GACGACGAAT CCCACGCTTG GGGTTACGAA GATGAACTCG CCCTTCACTC CGAGGACGAA 
GGAGACAAGG GGGATACACC GACAGCCACT CCCCGGCGTA CCACACATTC CCGTTCCCGA 
GCATTATCGT CCGTTGCGCC TGCGTCGCCT GTCGTGTCTG CCCCGCCTGC CCCGCCTGCT 
CTAGCCCCCG AGATCATCAT GGAGACCAAA GCCGAGAGCG AGATCCAAGA AAAGACAGAG 
GTAGATGAGG AAAGAGAAGA TCGACACGTC GAAACACATC TCGACCCTGT CAAACGTCGT 
ATCTCCGTCC GACTCCCTCC CCAGCTCCTC CCCACTTTTT CTTCTTCCAC CTCTATCCCA 
TCCCCGTCCC CCGACTCCAT CTCCAGCGCC GCTCCAGCTG CGCAGCGATC CCCTACGAAA 
TCACCAACCA AAACGATTAT CCGATCAGGC AGCGTCCCCT CCCTTTGCGC AAAAGTCAGT 
AGAGAAGCTC TGAACGAGAG GCTGGAAGGG GTTGTGAAAA AGTCTGGGAT CGTCTCGTCT 
TCATCCATGT CAGCGACAAC GACAGCACCA ACGACAGCGA CGACGGGGAG GAGGGTGTCG 
GTGTTGAGTA AAAAAGAATC GACGAGCTCG TTGGCGTCTG TTGCCGAAGT GAACAGCGGA 
GGGGGAGGAG CAAAAGTGGT ACAGAAGAAG AATTCGTTTT CGTTTGCGAC ACCTGGTTCA 
CCACTCAAAG TCAAGATCCC CCTCTCACCT GCGCCAAATA CCCAATCGCC CATCCCCTCA 
CCGAGAAAGA CGAGCCGTAA GCCAAGCCCC ACCAAACCGA ATTCCAACCC CACCCCGAAA 
CCACAGTCGA ACCGCAACCG CAACCCAAGC CCGACCAAAT CCCCGCTCGT CTCTTCCAGA 
CCCATGGAAC GAGCTCCTTC AGACACGTCT GCCAAATCCC AAACGACAAA CGGCGCGTCG 
CCGCACAACA GCCAACCGCC GCCGCTCGCC TCGCCACGCG CGTCAGACTC GGCATCGTCG 
TCCGAGGGCA AATGGTTGGA GAGCCCGCGT GGGGAAGAAG AGGCGCAGCA ATTGCATTTC 
CTCGCGCCTG CAAGTGGTGG CGGTGGGTAC CAGTCGTTCT CCCCGCTCAT CTCCCCCACA 
AGCCCGCAGG ACGGTCTCGA GTGGGGGTTA ATGCAGCAGC AGCAGCAGCG GCAGGGGCAG 
GACCAGGACC AGGAGCAAGG TCTTGGTTCA CCGTTTACTT TTCATTCCCT TCGTCCTCCA 
ACCGATTCAG TCATGTCCCG CCTCTCCCTC CCTCGTCCCC GCTCGCCCTT CTCTTCAGTC 
AGCGGTCACC ACCACCACTA CCACCACGAC CCCATGGCCA AACACGATAC CCTCCCAATC 
CCATTCGACG AAATCTCGAT CCATGCCTCC CCATCTTCGA CGCCTTCCTC GCCTTCAAGC 
TGCCATAGTA TGCTGCCCAG CGTGAAAACC AAGATTGCGC AGATGGAGAG TAGGGAGGAA 
GCATTGAGAA AGTTTAGTGT TTCGGGATCG GCAATGCTGT CGCCGCCGTT AAGGCTGTCG 
AAAACGGATA GCGAGAGGCA AACGGTTGAG AGAATGGAAG AGATACGAGA AAAGGAAGGC 
GAGAGCGGAT GGAGGAATGA TCGAGGGGAG GAGAGGAAGC CGCCCGTCAA ACGGAAGAGT 
TACACCGCCG CCCTCGCTCC TCGAGCCAAT CGAACCGGAT CCAAAGCACC TCTCTCCGCA 
CCGCGACCTT TTATCCCTCG CCAAACGTCA ACGTCTACCA TACACTCGAC CCAATCCATA 
TCCTCCGGCT CCTCCTCCAA CTCCAACTAT GACTACGACC CTATCTACGC CCCCGAATCA 
AACACAAGTA CACCCAAGGT ACCAAAACGC CTTCCTGCTT CACCCTCGGC GACGACACCG 
ACCGCTAGTC CAAGAAACTC CCTCGTCCAT AACGGTCGTC TTCCAATCTC CCCAGCGTCG 
ACGAAAAGCA CAACGACCTC ATACGGGGAT TTGATGAGCA CGCCAAAGCT CGATCCGTTC 
GGACTGGGGT ATACATCCGG TGGCATGAAC GGGGTGGGGC CTGGAATGGG TATGGCTCCG 
ATTGGAGGAG GATTGCACAA GGTGGACGAA GAAGTAGGGC ATGAGGGATT ATCGAGGGAG 
AGTTCATACG AGGTCGGCGG ATACGATTCC GGTCGATGCG AAGCACGGGT TCGGATGGAA 
TGATTAGGGC GAGAAGATAC GGGGGGATAT CATGCGTTGT AAGGAGAGAT GGAGAAGATT 
TTGAAACAAG TGCCGTAATG TTCAAATATT GAGATATGGA AGCGCGAAAT AATTATAGAG 
TTATACAAAA TGACTTAAAG 

 

Protein sequence

MYRDEAHGEE NGGDKDDDRQ RLVPSPTADT DADAHAAPSR APSSASVIST SFSASTHHTS 
SSKVGRVKSS EVLRRRGAAK EGGKYMQLEG GDGEREDEEI VRSPLSGKDG YREQRLPSYH 
HQHPSVHAPA PVFAPPAAYA FPYPPRRTGQ PETFQATDLP RSASQPMHLY SVPAFFDPTY 
TTARPAGDDS QDDELRSRPW SESTLDGHAA GPVVRHAAVV GGAGDPAGRC AVAAAVAGPA 
GGGGGRGRGA AGGEQEGACA GGGGRGGGAG VCGGGGGRAG AGGGAGAWGA AGSAWAAARC 
AWWGLKLSSA RHMFYHHAHA LALGPPSPLA ASPADADGFC LAAPGTHSIP FRFPLPPAAG 
AKGTFTPPRR GGPTVRYVLV ASLKTHVPPT GKRSIAHFYR PIVLLPALDP ARVLAPAAEP 
LQACAEDALG WSLKGDRGRV ALHVALGRAT WVSGQRLWCQ VGIRNGSLRK IKNLSLALLQ 
DVRTFGPKSA TDQPVETHRK KVAEEAVEGD FTTHGAGRVT GKGWWTGVEP GESGHWDMSI 
QVPTGLLSIR RTKLVDVSYT LRVTLNNSIY VDLPVTLISF LSIDPPPMPG GATRGVPMAE 
WAAVRGTPVP APHEEEGKSR HTQETPIPAA RASSTTLHPD PSQPLVQPPP PLPAFESHSQ 
CESATSTYTS PSNAASATSL PNLFTIPAYS RAQAHAQAQS SSPHLSAFSG FSPRPETYAY 
PEDDPQLDID DENQDTISRA QNRAKGRQRS LMIIRAEMER DDEERKMSFA QGWDADARGG 
AQTQEGTMEG TYETDVDVER TPMPEPSAYL PRMDTAPERD MPDVERGIEE LLEMEEEGWD 
FDSVDAHPPS HQPYQPYTDQ NTEMDQNVDP EHPHQHQQDY GQGQELELLD EERREIERVI 
PHPSHELKAD DEQDEPDEPD RDDESHAWGY EDELALHSED EGDKGDTPTA TPRRTTHSRS 
RALSSVAPAS PVVSAPPAPP ALAPEIIMET KAESEIQEKT EVDEEREDRH VETHLDPVKR 
RISVRLPPQL LPTFSSSTSI PSPSPDSISS AAPAAQRSPT KSPTKTIIRS GSVPSLCAKV 
SREALNERLE GVVKKSGIVS SSSMSATTTA PTTATTGRRV SVLSKKESTS SLASVAEVNS 
GGGGAKVVQK KNSFSFATPG SPLKVKIPLS PAPNTQSPIP SPRKTSRKPS PTKPNSNPTP 
KPQSNRNRNP SPTKSPLVSS RPMERAPSDT SAKSQTTNGA SPHNSQPPPL ASPRASDSAS 
SSEGKWLESP RGEEEAQQLH FLAPASGGGG YQSFSPLISP TSPQDGLEWG LMQQQQQRQG 
QDQDQEQGLG SPFTFHSLRP PTDSVMSRLS LPRPRSPFSS VSGHHHHYHH DPMAKHDTLP 
IPFDEISIHA SPSSTPSSPS SCHSMLPSVK TKIAQMESRE EALRKFSVSG SAMLSPPLRL 
SKTDSERQTV ERMEEIREKE GESGWRNDRG EERKPPVKRK SYTAALAPRA NRTGSKAPLS 
APRPFIPRQT STSTIHSTQS ISSGSSSNSN YDYDPIYAPE SNTSTPKVPK RLPASPSATT 
PTASPRNSLV HNGRLPISPA STKSTTTSYG DLMSTPKLDP FGLGYTSGGM NGVGPGMGMA 
PIGGGLHKVD EEVGHEGLSR ESSYEVGGYD SGRCEARVRM E