Gene CNF04780 details

Gene Information

• Locus tag: CNF04780
• ID: 3258501
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 1391645
• End bp: 1393863
• Gene Length: 2219 bp
• Protein Length: 450 aa
• GC content: 46%
• IMG OID: 638257596
• Product: transporter, putative
• Protein accession: XP_571444
• Protein GI: 58268576

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCACATATT TACACTTCGT CTCCACAGCT TATTGGATGC TGGCTTGTCT GGTGACTAAA 
ATATAAGCTT GCAGGGTCCG AAGTGCGCGA TGTTGGTACG TGCGCTCGTT TGCCTCACTG 
ATGACTTTTG GGCATGGCTT ATTATTGTCT CTTGCAGCTC GTAAATCAGT CCAGACTCAA 
TGGTTTCTTT TTCCATTAAT CAAGGATCTA GTGGCTCTTG ACCCTCATTG AATCTCCATT 
CTCACGAAGC TGTGTTCAGC CTTTAACAAT ATGCTGAGGA GGCTACAAAA GGACGTTCTG 
TTTTTCACAG CCTTTCCGTT CCCGTCGATT ATAACACTAA ATCGTCTAAG TCTCGGGAAG 
GAAAGATTTT AAGCTAAGGT ATATAAAGAA AAGACAAGAT TTATCTTTCC CGGTTGACAT 
TCATCTCTCA CCTCTCATTG TCCCAAGCAT GTCAGAAACA GAAGATCTCG AACTGCGCGA 
CAGGTCTGTC AAGTCGGTCA AATCTAATTC GGCTGCATCC GTTATCGTTC CTACTTTGAA 
TCCCGGACAT GATGCCGAGT CAGCAGCTTC CGCTCTTCCG CCTGTAGACG GCGGCTGGAG 
GGCATGGTCA TTCTTGGTGG CCGCGACTGT CATTGTCATG CTCATATGGG GGCTGCCATA 
TTCTATTGGT GTTTTACATG TGTACTGGAC GGATACGCTC ATTAAGGGTG AAGGTGCTTC 
AACTCTGACT CTGGCTGCGA CGCTGCAGAA CGGCTTGTTG TACATGGCGA CAGCTCTTTC 
GGGCCCGTAG GTACCGTCTT ATTGTATATG CATGAAGGTG CTTGATTAAC ATATTTTAGC 
CTGTTCACTG CATTTCCAAG ATGGCAAAGG GCTTTACAGT ATTGCGGTCT ATTTGCTGCT 
GTGATCACTT TCATCAGTAG TGCGTTTGCG ACAGAGGTAA GCTAGCAATT CTACCACGAA 
CTCGACTGAT AATCAGCCGT GGCACATTCT CGTTGCCTTC GGCCTTATCT ATCCTCTTTC 
TGGAAGTACG TTTCAAAAGA TACCTTAGAT TCATAATAAC TGACTAACCC AGTCTGTTAC 
CTCCCATGTA ATACCCTTCT CTTTGAGTAC TTCTTCTCTC TTCGAGGTAT CGCAACAGGT 
GTTGTTTTTG GCGGTACTGG TCTCGGAGGT GCATCAATCC CATTCCTCAT GAATGGTCTT 
CTCAACAAAA TTGGATATAA AGCAACGATG ATTTCATTCG GTCTTGGGTA CCTCGTCATC 
GGTTCCATTG CCATCGTATT TATTCGACCT CGTATCCCTG TCTCTCGCCA GCAGACGATG 
GAGAAAAGGA AGCCTGTTAA TTGGTCATTC ATGAAGAGTA CTCCTCTGAT CATCGGAACT 
ATCACTATCT TCTTGATCAG CCTTGGTAAC TTCATTCCTA GCTTATGGCT TCCCGGTAAG 
CACCAGCCCC TTCTGTCAGG TGATGTCTCC CATTAACCAA TCCCTCAGCG TACGCCTCTT 
CGCTCAACCT CACGCATCCT TCAGGAACAG GTCTCATCGC CATTCTAAAT GCTGCTTCAG 
TCCCAGGAAA CACTCTCCTT GGCTATCTTT CAGATCACAT GCCTGTCCGA ACAGTCATCG 
TCATCTCATG TGTTGGTAGT GGCCTTTCTT GTGCCTTCCT TTGGGGATTT GGTAGCACCG 
ATGGGGTGTT GATTTTGTTT GCGTTGATTT TTGGTTTGCT CGGACCTAGC TTTTCGGCAA 
TCTGGACGCA GATGATTGGC CTCATTTGTA GTAAGTTGGA TGATGCTTGA GTGTGGAGGC 
TGGGCTGAGT GATGGATGCA GAGGACGACC TGATTTCCCC TCCTCTTGTT GTTTCGCTTT 
TCACCTTTGT TCGAGGGGTT GGGAGCTTAA TGAGTGGTGA GTGGGAGTGG ATTTCCCAGC 
AATAAATACC TGACATGAGT GAAGGCCCAA TCTCCCAAGC ACTGTTGAAG ATAAATAACC 
TTAACGGGAG CATTGGAGCT TACGGATTCA GCAACTATGT GAGCCAATAA TAATATTTTC 
ATCTCTAGTT CTTCGTCTAA CACTTTCCCA GGGAGTCCTC TTGATCTACG CGTCCGTTAC 
AATCTTGAGC GGTGGTGCTA CGGGTTATCT GTTCAAATCG TCATAAATTA TCTTCATTCC 
CTTAGATCTG TTGTAAAACT AGTTTGTTGC TTAAGAGAGA AAGAGAGAAC CGGGAAACA 

 

Protein sequence

MSETEDLELR DRSVKSVKSN SAASVIVPTL NPGHDAESAA SALPPVDGGW RAWSFLVAAT 
VIVMLIWGLP YSIGVLHVYW TDTLIKGEGA STLTLAATLQ NGLLYMATAL SGPLFTAFPR 
WQRALQYCGL FAAVITFISS AFATEPWHIL VAFGLIYPLS GICYLPCNTL LFEYFFSLRG 
IATGVVFGGT GLGGASIPFL MNGLLNKIGY KATMISFGLG YLVIGSIAIV FIRPRIPVSR 
QQTMEKRKPV NWSFMKSTPL IIGTITIFLI SLGNFIPSLW LPAYASSLNL THPSGTGLIA 
ILNAASVPGN TLLGYLSDHM PVRTVIVISC VGSGLSCAFL WGFGSTDGVL ILFALIFGLL 
GPSFSAIWTQ MIGLICKDDL ISPPLVVSLF TFVRGVGSLM SGPISQALLK INNLNGSIGA 
YGFSNYGVLL IYASVTILSG GATGYLFKSS