Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF04310 |
Symbol | |
ID | 3258320 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | + |
Start bp | 1250224 |
End bp | 1251180 |
Gene Length | 957 bp |
Protein Length | 190 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257549 |
Product | cytoplasm protein, putative |
Protein accession | XP_571388 |
Protein GI | 58268464 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.060224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CCCACGAGCA TTCACCATTC CATATCATTT GCCATTTATT CTCAATATTC TATCAGGTTC TCCGAGCAGT CCTCTCGCAA CTAAAACGCC ATCGCTAAAG AGACCGGCAC GATGCCAACT AGGGTGATTC CTGGGGTAAC AATGGTTGAC GACGGTCCAT CAGTGGTTGT TCCGCCCATC AACTTCTCGC TTGTTGCTCC AGGCATATAC CGTTCAGGAC ATCCCAACCG CAAAAACTTC CCTTTTCTCA AAAGGCTCAA CCTCAAGGGC ATCATCTATG TCGAAGGATC TGATCCTTAC CGGCAAGACT CGCTCGACTT CGTTCAGTCG CAAAATCTCG AACTGTACCG CTTTGACTTC AGCAATGAAT CCGACTTGTA CACCCCAGAA GGACAGGAAC GCATGGAGGC TCTACTGAAG GTCCTGTTGG ACAAGAGAAA TTATCCTCTG CTGGTCCATG ATGATACTGG CAAAGGAAGT TGCACTCTAG TGTGCGCTTT GATCAGGAGG TTTCAGTCTT GGAGTCTGAC GGGCCTCTTT GCGGAGGGAG ATATGTTTGC TGGTCCCGCA GGAGGAGCGG AAGGTGTTGG ACTAGGAGAG ACTGGGATGG AGGTGCGTCT TGCGTCTATG TGACTTGGAT CGTGTATTGA TTGTAAGGCT TCGACAGTTC ATTGCCGCAT TTCAACCAAA GCTGGTGGCT TACGACCGCA CATGGCGACC AGATTGGGCT GATTACTGAG TCCGAGTCCA CACTATCTGT AAAACTTTTC TATGCCATAA AGGAGCCAAA TTGACCTATC TTTCGTACAT TATCTTCTTG TTGACAAAGA TTGACGACCA TCTGTAACGC ACCAAAATCA TCGTTTAGGT ACAGTCCTTT GAGAGCGAAC TCTGTCACGC GAGAGGTCTA CATGTGTCAC CTCCAGCAAT CTTCTCGGTG CCCTATCATA CACCGTC
|
Protein sequence | MPTRVIPGVT MVDDGPSVVV PPINFSLVAP GIYRSGHPNR KNFPFLKRLN LKGIIYVEGS DPYRQDSLDF VQSQNLELYR FDFSNESDLY TPEGQERMEA LLKVLLDKRN YPLLVHDDTG KGSCTLVCAL IRRFQSWSLT GLFAEGDMFA GPAGGAEGVG LGETGMEFIA AFQPKLVAYD RTWRPDWADY
|
| |