Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF04190 |
Symbol | |
ID | 3258406 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 1218935 |
End bp | 1222024 |
Gene Length | 3090 bp |
Protein Length | 844 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257537 |
Product | vesicular-fusion protein sec18, putative |
Protein accession | XP_571385 |
Protein GI | 58268458 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTTAAATCT ACACAATCAT GTCTTTCTTC AAACGAAGCG ATCCAAATGC CCCAGCAGCC CGACGAGCAG CACAAGGATC TCCTGCTCCC TATCAGCGAG TGCCCGACAA TGCCTCGTAC TCATCTCTTC CGCCCCCAAT TCAGCAAGCT CCGCCACCCC GACAGAGTCC TCTACCTTCC CAAGACCCTT ATGGCCGAGC AAGCGGACTA GGAGGTGGAT ATGGAGCTCC CGTTTATCAG GTAACGCAAC CAACACACCC GGGTTTGGGA CCAAGGGGTG CAAGCCATTA TAGCGAAAAG TCTCAGAATG AATATGGTTA CCAATCCCAG CCCCAAAAAG GGTATCCTCA GCAGAGTCAT GGTAGTACTG GAAGTGGGAT GTGAGTATCT ATGATGCCTA CAATTTATAG GAAACTGAAA GATGTGGTTG TTGTTATAGC TTCAACATTG CACCATGCCC TTCGGATGCC CTGGCCTTGA CTAATCGCCT TGTCGTACAT CCATCCGATT TCCCTTCAGA CGTTGACTTT GCTCTCCTGC GAGGACGATT CGTGTTTTCT ATCATGTAAG GATTTGGCAA TCCTTCCTGT GTTCTATACT GATCATCCAT ATGTACAGTC GCGATAATAC CGGCACTTTG CCGCCCGGCC ACGTCGGCCC GTCCAAGATT ATCCGCCAAT GGGTCGGCTT ATCAGCCGTC GGTGAGACTG TTGACATTGA ACCTTACCAT CCAGGAAACG GGGAATGGGC CAGCACTGCA GAGATCGAGG TAAGTCGTAA GAGAATCGAA TGTTTGGTTC GAAACGCTGA CCTCAACACA GGTTGGGTTC AGGCTGAAAA GGAAGGAAAC CCAGGATATT TTCGACAGCG AGGAGATGGC TGCTGCCTTC ATTAACGTAT GAATCACCTC AGGTATCCTT CTCCTTTACT GATATAAAGT AGGCATTCCC TTCGCTTCCT TTGACCCCTC TCCAACCCCT TGTGTTTGAC TACCGTGGAC ATGAACTCAA AGCCACTGTC CGAGCAATCT CCACGCTTGA CGGTCAAGAT GGTCGAACCG GTGTCACCAT GGAGGGTACA GAGATCATTT GGGTAAAGGA CCCCACTAGC GGCATAAAGC TCAAGAATAG TTCAAAGAGG TAATACCGCT CTTTCGAAAT CTTTCATGCA TTAAGCTGAT AATGTCCCAG AGGACCTACT AATGCTATTC TTGCTCCCAA CTTCAAGTTT GAGGATATGG GTATTGGTGG CCTCGATACC GAGTTTGCTG CCATCTTCCG ACGAGCATTT GCGAGCCGAA TCTTCCCTCC TGGCCTTGTC GAAAAGTTGG GCATCCAACA CGTTAAAGGT CAGTTACATT GAGTTTTCTA CTGTCCCACA CATTCTCACC ATTCTATAGG TATTCTCCTC TATGGCCCTC CCGGTACCGG TAAAACACTT ATGGCCAGGC AAATCGGCAA GATGCTGAAT GCTCGAGAGC CCAAGGTTGT TAACGGGCCG GAGATTTTGA ATAAATTTGT CGGTCAGAGT GAAGAGAATA TCAGGAAACT GTTCGCCGAC GCCGAGAAAG AGCAGAAAGA AAAGGGCGAC GAGAGTGGTC TTCACATCAT CATCTTTGAT GAGCTCGACG CCATTTGTAA ACAGCGTGGC TCCACCAATA GTGGCACCGG CGTCGGTGAT TCCGTCGTCA ATCAACTTCT CGCCAAGATG GACGGTGTCG ATCAACTGAA CAATGTGCTC ATTATTGGTA TGACCAACCG TATGGACATG ATCGACGAAG CCCTTCTCCG TCCCGGACGT TTGGAAGTTC ACATCGAAAT TTCCTTGCCG GACGAGGAAG GAAGGTTACA GATTCTGAAC ATTCACACAA CCAAGATGAG GAGCAATGGT GTTTTGGCCA ATGATGTCGA TTTGGCGGAA CTCGCGTCCT TGACAAAGAA CTTTTCGGGT GCCGAGTTGG GTGGGTTGAC CAAAAGTGCG ACAAGTTTTG CGTTCAACAG GCACGTCAAA GTAAGTTATG GAATCCCTCT AGTCTCCTCC GTTCATTGAC ACAACTGACT TGCTGTGAAT ACAGGTCGGT ACGGTTGCGT CGTTTGAAGA TGTCGAGAAT ATCAAGATTG GCCGAGCGGA TTTCCTACAT GCCTTGGAAG AAGTACAGCC CGCCTTTGGT GTCTCTGAGG AGGAACTGCA ACAGGTCGTC CAGAACGGCA TCATTCACTA CTCTTCCCGT GTGAATGTGA GTTCATCATA ACAACCACTA AAGCATATAT AAGCTAACAA CTATCTAGGA AATTCTCAAC GACGGCCAAT TACTTGTGGA ACAGGTCAGA AAATCCGAAC GTACCCCTCT TGTCTCTGTG CTTCTTCACG GCCCTTCAGG TGCGGGCAAG ACTGCTCTCG CCGCTACGAT TGCAATGGGG TCAGACTTCC CTTTTATTAA GCTCATCTCA CCCGAAACTA TGGTTGGCTT TACAGAATCT CAAAAGATTG CCCAACTCCA CAAGGTGTTT GCCGATAGTT ATAAGAGTCC TCTTAGTGTG GTTGTTGTTG ATAGTTTAGA AAGACTCTTG GGTAGGTGCT TCTTTTTGTG TTTCGTTAGA CCTCGTTGCT TACGCTATAT TTCACAGACT GGAATCCTAT CGGTCCCAGG TTTTCGAATG GCGTGTTACA AGCTCTTGTA GTCCTATTCG GCAAACGACC TCCCAAGGGC CGTCGACTTC TTGTCCTTGC TACAACATCC AATCGCTCCA TACTCTCCGA CATGGATGTC CTCTCCACTT TTGATGCCGA TATCCCTATC CCGCCTATCA CTTCTGTTAA ACACATCGAA CGATGCCTAC GCGAGGTCAA CTTATTCTCT TCGAATGAGG AGATGCAGCG AGCAGTGGGC ATGTTGCGGG ATGTCAAATT TGGCGAAGGA GGGAATGGCG AGTTGGTGGT GGGTGTGAAG AAGTTGTTAT CGATGGCGGA GATGGCGAGA CAAGACCCTG ATCCTGCAGC CAAGTTGGTG GCGAGCCTGA TAAGAGAAGT GAGTTAGAGA TAGAATTCTG TTGTATCATC CGTAATGTGT AGTGTCCAGA TGCCAGCAAA
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Protein sequence | MSFFKRSDPN APAARRAAQG SPAPYQRVPD NASYSSLPPP IQQAPPPRQS PLPSQDPYGR ASGLGGGYGA PVYQVTQPTH PGLGPRGASH YSEKSQNEYG YQSQPQKGYP QQSHGSTGSG IFNIAPCPSD ALALTNRLVV HPSDFPSDVD FALLRGRFVF SIIRDNTGTL PPGHVGPSKI IRQWVGLSAV GETVDIEPYH PGNGEWASTA EIEVGFRLKR KETQDIFDSE EMAAAFINAF PSLPLTPLQP LVFDYRGHEL KATVRAISTL DGQDGRTGVT MEGTEIIWVK DPTSGIKLKN SSKRGPTNAI LAPNFKFEDM GIGGLDTEFA AIFRRAFASR IFPPGLVEKL GIQHVKGILL YGPPGTGKTL MARQIGKMLN AREPKVVNGP EILNKFVGQS EENIRKLFAD AEKEQKEKGD ESGLHIIIFD ELDAICKQRG STNSGTGVGD SVVNQLLAKM DGVDQLNNVL IIGMTNRMDM IDEALLRPGR LEVHIEISLP DEEGRLQILN IHTTKMRSNG VLANDVDLAE LASLTKNFSG AELGGLTKSA TSFAFNRHVK VGTVASFEDV ENIKIGRADF LHALEEVQPA FGVSEEELQQ VVQNGIIHYS SRVNEILNDG QLLVEQVRKS ERTPLVSVLL HGPSGAGKTA LAATIAMGSD FPFIKLISPE TMVGFTESQK IAQLHKVFAD SYKSPLSVVV VDSLERLLDW NPIGPRFSNG VLQALVVLFG KRPPKGRRLL VLATTSNRSI LSDMDVLSTF DADIPIPPIT SVKHIERCLR EVNLFSSNEE MQRAVGMLRD VKFGEGGNGE LVVGVKKLLS MAEMARQDPD PAAKLVASLI REVS
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