Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF01060 |
Symbol | |
ID | 3258161 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 322213 |
End bp | 324207 |
Gene Length | 1995 bp |
Protein Length | 468 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257229 |
Product | conserved hypothetical protein |
Protein accession | XP_571571 |
Protein GI | 58268830 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTCTACTGCT CTTTCCGTAA GTGGGGGAAA TCACAAAGCT TACCAGGAAG ATCCCAACAC ATGTGGGGGA GTGGTATATA AGCAACGTTA GAAGCCCGCG GTACACCCTC CTCGCTTCAA CTAAACTGAG TCGAGGAACA CAATCAAGAT GTTCTTCAAG AAGAAAGCAG CCAACCTTAC CGCTGTCGAC TATACTGACC TGTCAAAGTC AGAGTTGTAC TTTGCCTTTT CCCTGGTCTC CTCCTTGGTA GGTCGTCCTG ACTCAAAGAC TGCACAACGA AACTTATCCT GAGCACAGTT CTTCCTTTGG GGTCTTTCTT ACGGTCTGCT AGATGTCCTC AATAAGCACT TCCTCACAAT CTGTAAGTTG GTTATCGACC CGTTCCATCA TTAAGCTAAT CCATTTGGTT AGTTGGCCTT ACCAAGACCC AATCAACCTT ATTGCAGTTT GCCTACTTCA TTTCATATCT ACTTGTAGCT CCTCCTATGG GTATCTTCAT GCGCAAATAC GGTTACAAGA AGGTTCGTGC TACCTAGCGT TTTTTCAGCT TCCACTCACA GGTGACTAGG GTATCCACAT TGGTCTCGGC CTCTTTTCCA TTGGAGCGGT CCTCTTTTGG CCCTCGGCAA AGTATGAAAA GTACGGCATG TTCATTGCCT TTACTTTTGT TGCTGCTAGC GGCCTTGCAA CGCTCGAAAC GGCCGCCAAC TCTTACATTA CCGTCCTCGG CCCTCCTGCT CAATCTGCCA TGAGGCTGAC CTTTGCTCAA GGATTCAATG GTATCGCCAC TGTAGTCGGT CCCATTATTG CCTCCCATAC CTTCTTCAAC GGAGCCAACC AATATAGTTT GGACACTGTG CAATACGTGT ACCTCGCTCT GGCTTGTTTT GCATTTTTGC TCAACATCTT GGTGGGCTTT ACAACACTCC CTGAAGTTAA GCAGACAGTC ACCACGGAAC AGCAAGACAA GATCGCTGGT CAGAGCTTTT GGAAGCAATA CCATACTCTC TTTGGAGCTC GTGAGTTTGG CTTTCTGGAG TTCTCAAAAA TGATTTAGCT TACCCCAGAA TAGTTTCTCA GTTTTTCTAC ACCGGTGCCC AAGTCGCTGT GGCCTCCTTC ACCATATTCT ACATCACCGA GCAGCCCGGA ATCTCCCCTG CCTACTCTTC CGCAACCGCT TCGAACCTTT TCTCGGGATG TCAAGCCCTC TTCACTTTTG GTCGATTCCT CGGTGTTGTA TACTTGCGAT GGATTGATCC CTCATTCGCC TTGTTTATAA ACGGGATTGG CCTTTGCTTG TTCAGTATTT TGACAGCTAC TATTCCTGGC CACGGCGGTA TTGCATGCTT GTTCATGATC TTCTTCTTCG AGTCGTGAGC ATTATAAGGC CACATGCCTC AGTTGATCCA CTAACGCGTT CGTATGTTAG TATCTGCTAT CCCGTCATCT TCAGTGTCGC CACTGCCGAC CTCGGCTCCT ACGCCAAGAT CGGTTCCGGT GTCGTTGCCT TGGGTGTCTC TGGTGGTGCC GCCTACCCCT CTATCCAAGG TGCCGTTTCA GACCATGTTA ACACATGGCG ATCGTTCTTC ATCCCTCTTA CTGGCTTTGT TCCTCTGATG GTCTATGGCT TCGTCATGTG GATCATCAAC AGCAGGAAGT ATGGCGGTAA GCTGACCATT TGGGGCAATA AAGTGAGTGT CAAACGGTTG CTTCTTTCCT AATACAGATG GTTGCTGATG GCTTGCGATA GACTGCCCCC AATGTCGAAG CGATACTGCA AGCGCAAGCC GAAGCTTCAG TTGAGAACGT GGAGACAGCT TCTGTCAGCA GCAAAGAGAA AACCGCTCAA GAGCTTAAAG AATACGCCTA GAACAGGGTT TCTTGATTGT ATACAGATAA AAGTGAACAA ATGGGTTCAG AGTTTTAGGG CTTAGAGGAA ACATCATTTC TCTCAGTTGT TTTTGTACCA ATAGACACAT CATTAGACCA TTGGT
|
Protein sequence | MFFKKKAANL TAVDYTDLSK SELYFAFSLV SSLFFLWGLS YGLLDVLNKH FLTIFGLTKT QSTLLQFAYF ISYLLVAPPM GIFMRKYGYK KGIHIGLGLF SIGAVLFWPS AKYEKYGMFI AFTFVAASGL ATLETAANSY ITVLGPPAQS AMRLTFAQGF NGIATVVGPI IASHTFFNGA NQYSLDTVQY VYLALACFAF LLNILVGFTT LPEVKQTVTT EQQDKIAGQS FWKQYHTLFG ALSQFFYTGA QVAVASFTIF YITEQPGISP AYSSATASNL FSGCQALFTF GRFLGVVYLR WIDPSFALFI NGIGLCLFSI LTATIPGHGG IACLFMIFFF ESICYPVIFS VATADLGSYA KIGSGVVALG VSGGAAYPSI QGAVSDHVNT WRSFFIPLTG FVPLMVYGFV MWIINSRKYG GKLTIWGNKT APNVEAILQA QAEASVENVE TASVSSKEKT AQELKEYA
|
| |