| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00880 |
|---|
| Symbol | |
|---|
| ID | 3258027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | + |
|---|
| Start bp | 279763 |
|---|
| End bp | 282083 |
|---|
| Gene Length | 2321 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638257212 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_571497 |
|---|
| Protein GI | 58268682 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGAACGACGT CGAGAATACT TTAGTCGACA ATACTTTATT AACGTAACCA CAGATCGTTC
GATACCTCAA CTTCGTTCTT CTTTGCAACC ACAACCAACT ACCCAGTAAT TATTAAGCAC
TCAACACAGC ACACAGTACC TTGGTATCTC AACATCCCAC TTTTATCACT ATGCCCTCTT
TCATGTCACC TTCCTCTGGG GTCTCTATCC TGCCGGATAT GCGACCACCA AAATCGCCAC
GCCGGTTCTT CACCTTCTCC ATCTCAAGCT CAAGCCTGCC ACCACTTCCA CCCCTCACTC
CTTCTGTCTC GCATTCTTCC AGAGGGAATG ATCACTCAAG TAATGGCGTG ACGGTCGTAC
GAACTCCACA AGATGCAGCT GGAGGCATGA GGCAAGCCGC CGGGCTCATT TCACCTCCTT
CCAACCAAAC TCCACTCCCT CCCGTCCCAC CTCTTCCATC CCTTTCTTCT CTCCCAAATC
TTGCTTCTCA GGCCAGGTAT CCGCAACCAT CTACTGATAC GCACACCCAT GGGTACCGTC
ACCAGCCTTC AAAGTCCGTT GATAACTCCA ATATCTATGC TTCTGGCAAG CTCGAAAGAA
TGGGAGTGCA TAGAAGTACA AGTGCTCGAG ATGATCTGCG AGGCGGTCTT AATAAGAGCA
CAAGGGGGCT AGTGAAAAGT CCGAGCGCAG CACCAGTTCT TGGGGAGCGA AATGAAAGCG
AAGAAAGTGA TAGACTCGGA CCTATGCCAA CAACGCCGGG TAGACCTTTG AGAGGGTCAT
CGTTTCTTTC GCCTGGTCAT TCCAAGTCTC AATCTACCAG CGCTAGCTAT GTAAGCTCAT
CATCTGCGTC ATTCCACTCG CGATCCAAGT CCGTTGCTCG TTCACCTCGA ACGTCTACTA
CGACCACGAG CTCGACATCG CCATCCATCT CCACCGCTCC ACTCTCTTCT CCTGCCAAGC
GACCGTCCTT GATCTCAAAT CGATCGACAG TGAAACCTCC TCCCAGATCC TCATCTTTGC
CTAGGATTGA TACCCCTTTC AGCGCTGCCC TTCTTTTGTG TACCCGTAAA TCGCTTCCCA
AGCTGTCGTC TGGCGAGCAG GACAGTATTA CGCTGATCAA CATTGAATTT GCATACTCTT
TTGCGGATCC TCCCAGAAAT GAGAGTGTGA CTTTGCCCTT GGAAACGCTC AAGAAGGGTG
GAGGGAAGCT TTACGATTGG GTGGTGGACT GCTTAAAAAC ACAGGAGTAT GAAGAAGAGA
AGAAGGCTGA GGAAAAGGAA GCGATACGAG AGGAGAAAAA GTTGCCCGAG ATGACTGATG
GCGAGAGTGC GGAGGAAAGT GATTGGGATA GTGATGGCGA TCTTAGCGCT TTGCTTCGGT
AAGTCCATAC GTTTGCAAGA CTAAGGAAAG CAAAGTTAAT CATTGAGTTT CAGAGACGAA
TACTTCAAAT CACTGATCGT CTCATCGTCC TCCCCAGCAT CACACACAAC CCCACTTCCT
TCTATCTCAT CTCCACCCAC CAAGATTCTT GACCTCCCTC CTTTTGCCAA TGATTCCAAA
TCACCTGCGC TCCCCAAGCC TCCCAAAACA ACGCCAGGTT ACAAACGAGC GCAGACTAGA
AATCAGTACA CTCAATTAGT TAGCAAGCCG CGTGTACCCG GTAATGCTAT CGAGCCTGCC
GTCCCTCCTT TGGCGTATGC TGCAGCTTCC CCGACAGGGT TGACTCTACC TCTTAACGTT
AAGCGAAAGG GTAGCCGTCG TCTCTCGATT TCCCATATCA GCCAAGAAGC TGAGGCTTCT
ACACCCACCA AGTCGAAGAA AGAAGGAGTT TTTACCGAAA TGAGAGTTTT CCTCACCCGC
GAGGCGGGAG TTTATCACCA AATCTCCCAT AGACTGATCT CGGGCCAGTG GAACGTCTGG
GCCAACATCG GCGGTAGAGA AGCTAGAGAG AGAGTTGAAG CAGAGCTTGA ATGGCTGGGT
ATGGCTGATC TCTTACAAGA GATGAGGAGA CCCACCCTTG GCTTGAATCC TAGTCGAAGC
CAGAGTAAAG ACCTGAACCT CGGTTTGGGA CTGGGGCTCG GAGGGCAGGA GACGGGGAGG
GTGAACGAGA TGCTGATTGA CGATTTTGGT ACACCCGAAA GACCTGTTAA GTCTGAAAGA
CGAACGGAGG GTATAAAAAC GCTTTGTGGA GAAAGGAAAT TGGAAGGCAA GTGGAGGGAA
AGGGCGAGAG AGAAGAGCCT GGTGCTTCGC GGTGGTTACA TTTAGTTTAA AATTTAAGTA
GTAGCATCAT GTAGCGTACA TGCGAAATAG CTACCTGAAT G
|
|---|
| Protein sequence | MPSFMSPSSG VSILPDMRPP KSPRRFFTFS ISSSSLPPLP PLTPSVSHSS RGNDHSSNGV
TVVRTPQDAA GGMRQAAGLI SPPSNQTPLP PVPPLPSLSS LPNLASQARY PQPSTDTHTH
GYRHQPSKSV DNSNIYASGK LERMGVHRST SARDDLRGGL NKSTRGLVKS PSAAPVLGER
NESEESDRLG PMPTTPGRPL RGSSFLSPGH SKSQSTSASY VSSSSASFHS RSKSVARSPR
TSTTTTSSTS PSISTAPLSS PAKRPSLISN RSTVKPPPRS SSLPRIDTPF SAALLLCTRK
SLPKLSSGEQ DSITLINIEF AYSFADPPRN ESVTLPLETL KKGGGKLYDW VVDCLKTQEY
EEEKKAEEKE AIREEKKLPE MTDGESAEES DWDSDGDLSA LLRDEYFKSL IVSSSSPASH
TTPLPSISSP PTKILDLPPF ANDSKSPALP KPPKTTPGYK RAQTRNQYTQ LVSKPRVPGN
AIEPAVPPLA YAAASPTGLT LPLNVKRKGS RRLSISHISQ EAEASTPTKS KKEGVFTEMR
VFLTREAGVY HQISHRLISG QWNVWANIGG REARERVEAE LEWLGMADLL QEMRRPTLGL
NPSRSQSKDL NLGLGLGLGG QETGRVNEML IDDFGTPERP VKSERRTEGI KTLCGERKLE
GKWRERAREK SLVLRGGYI
|
|---|
| |