| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00440 |
|---|
| Symbol | |
|---|
| ID | 3258156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | - |
|---|
| Start bp | 158075 |
|---|
| End bp | 160653 |
|---|
| Gene Length | 2579 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638257167 |
|---|
| Product | basic amino acid transporter, putative |
|---|
| Protein accession | XP_571477 |
|---|
| Protein GI | 58268642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.685855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCAGAAGTGC GGGCGAATGG CCTCCGTACC CCTCACTCCA CTTCCCATGA ACACCACTCA
TAACAATGTG CATCACCGAT ATTCACCGCA CTCTGACACC ATAACCACAC CCATAACCGA
AACCACTCCT GCACTCGGAT CGGATGATCA CGCGGATACT GGAAATGAAA ATCAGCCTGG
TAGGAGGGGC GATTCTGTTG ATGGAGAGGA TATTGATCAA TTCATAGCTG GTAAGCACAC
CATACAGTAG TGGAGTGAGC TGATACGGCT TATGGATAAA GATAATCAAG CATTGGATGA
ACTGCCGATG CTGACAGGGT CGAAACATGC AAACAAGCGG TTATTTGCTG CGTTCATGAT
CTTCGGTCTT TTAAACAATG GTGAGTCCTG AGCAGAGCAA TCGAGCGACC GGCTCAGCTT
CTCAGCTCCA GGGAAGCTGT CATGGTGAGG GGGTAAAATA ACGAGCTAAA CAATGTATTC
TACTCATCGA CACATGATAG TCCTGTACGT GATCATCTTA TCAGCAGCGT TGGACCTCGT
ATCGGCCGAT ACTCCCAAAG GTGTTGTCGC GCTGTTCAAC ATCTTCCCTG CGTTGATCAC
CAAAGTTGTC TGGCCATTGC TCTCAAATGG AAAGATTCGG TATACTAGGA GAGTGGGGTT
TTGTACAATT TGTAGCTGGT TTGGTATAAT AGTGAGCCTC CCTCTTCCAT TCCTTTTTTT
CTCAAGTTTC TTCGTCATTT GGCTGGAAGG CTTCAATGGC TCGGTGGCTG ACACTCCTAA
CAAAGACAAT CGCATTATCC TCATCTCTAT CTCCACGTCT CCTCGGGATA TCCCTAGCCT
CATTATCCTC CGGTATGGGA GAACTCACCT TCTTACAACT CACGACCACC CTCCCTACTG
AGGCAACGTC CAAGACGGCT TTGGGAGCAT GGTCTAGCGG AACCGGGTTT GCGGGTGTAG
CAGGTGCAGG GATATGGTGG TTGTTAAGAG GCTTGGGTGT GAAAGGTGGG TTGGGATTGT
CTAGTGTGAG CCAAACTCAT TCCATTTGTT CGCATCGCAT TACGTGTGGT GAAGAGCTCC
GGGAATTGAC TGATTTTGTG TATAGTTTTT ACCATTGTTT TTTCCAATTA CATACAAATA
CATCCTGCCT CCCTTTTCTC ATCTTGAGGC TTCTTCAGAC TCATCTCCTT ATCAACGGCT
TCCAATGTCT TCATCATTAT CGAATAATAA CAATTTTCGG CCTCCTGCAA TCCTCATCTC
AGTGCCATCA TCCGAGTATG TCCCACAACA TACGCCTCTC TTATCTTCCG GGTTTATCGA
TCGAGACAGA GACAGGAACA GGGATGGAGA GGAATTAACA GATGGGGATA AGAGATTAAT
GGGAATGAGA GCTTCAAGGT TGACGACACA GGAAAAGATG AAGTTGCTGC GACCATTGGT
GGTGAGATAC ATGCTTCCGC TTTGTGCAGT TTACGTGGAG GAATATGTCA TCAACTCTGT
GCGTTCATCT CCCTTCCTTC CTTCTTCTCC TTGTCCCACT TTTCTCGATG AAGACTGATG
ACTGATGGCC GAGTTTGGGT TTAGGGAGTA GCACCTACGC TGGTTTTTCC ATTGCCAACG
TACGGACTTT GGTCGTGGCT CTTCAAATCT CCTCGTGATT ACTATCCTTT TTGGTCACTT
ACCTGTATGT TGCCCTTTTA TCCCGTCCCT TGAAGACTAG AAAAAGATTA CTTAATTTTA
ATCACGGATA CACCAAAAAT GACAGACCAA ACTTTTGTTT TTCTTTCCCG CTCATCCCTC
TCCCTCGGCC TACCGCCTAT ACCCAAACGA CTTCTCCCTT TACCGGCTAT CATCCAATTC
CTAGTCCTTT CCCTTCTTTT TCTTCAAGCA AAGACGTTTT TCTTCTCCTC TCCTGCTTAC
ACTCCTCCAG CAGACGGAGA TGGTGGGGTG GATAGAAGTA TTACAATTGT TTTCTTATTA
ATTTGTTTGG AAGGGCTGTG TGGTGGGAGC GGGTATGTCA ACACGTTTTA CCACGTGGGC
AGAGAAGGCA GTGTCAGTGA AAACTATGAC GCTGATGGCG ATAATGAGAT GGGTGGGGAT
CGAAGAACTG TGAATGTGAC GGAGATGGAG AAGAAGGCGA TGGAAAGAGA GTTTAGGATC
GGTGCTGTTG GAGCGGCTGA TTCGACTGGT ACGTTTTCCT CATCTCGTAT CCAAAGCGTA
ATTGGCGCAT TGAATAGATG AACGGATGCT GAATGAGTAA ATTTCAGGTA TCCTATTTGC
ATCGCTCATC TCAATGCCCC TTGAAATAGC ACTTTGTCGA AGCCAGGTTG ATCAAGGAAG
GACAATGTGT CGGGAGCTTT AACTGCCTGA ACTATAACTT CCTGAACTGT AACAGCCAGA
TTGAGACCGA AGCGGAGAGT GTCACCTTCT CGAGTACGTC TTAGTCTTCT ATTGTGGAAG
GCGTACTGCG CAATGTGTCA ACACAGTACA CATAATTTGT AAAAATAATG CATTCTTGTG
GAAGGCATAT TCCAATAATG TGTCAATACA GTACACATAA TTTGTAAAAT CAATGCATT
|
|---|
| Protein sequence | MDKDNQALDE LPMLTGSKHA NKRLFAAFMI FGLLNNVLYV IILSAALDLV SADTPKGVVA
LFNIFPALIT KVVWPLLSNG KIRYTRRVGF CTICSWFGII TIALSSSLSP RLLGISLASL
SSGMGELTFL QLTTTLPTEA TSKTALGAWS SGTGFAGVAG AGIWWLLRGL GVKGGLGLSS
FLPLFFPITY KYILPPFSHL EASSDSSPYQ RLPMSSSLSN NNNFRPPAIL ISVPSSEYVP
QHTPLLSSGF IDRDRDRNRD GEELTDGDKR LMGMRASRLT TQEKMKLLRP LVVRYMLPLC
AVYVEEYVIN SGVAPTLVFP LPTYGLWSWL FKSPRDYYPF WSLTYQTFVF LSRSSLSLGL
PPIPKRLLPL PAIIQFLVLS LLFLQAKTFF FSSPAYTPPA DGDGGVDRSI TIVFLLICLE
GLCGGSGYVN TFYHVGREGS VSENYDADGD NEMGGDRRTV NVTEMEKKAM EREFRIGAVG
AADSTGILFA SLISMPLEIA LCRSQVDQGR TMCREL
|
|---|
| |