| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE03330 |
|---|
| Symbol | |
|---|
| ID | 3257890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 949006 |
|---|
| End bp | 952229 |
|---|
| Gene Length | 3224 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638256916 |
|---|
| Product | ribonucleoside-diphosphate reductase large chain, putative |
|---|
| Protein accession | XP_570896 |
|---|
| Protein GI | 58267480 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.279804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACTTTTCTT CTTCTACAGA CAATCCACCT ACGAGACTCT ATATAGGGTC CTAGCACTGT
AAACAGCACT CAATTACGGC TGTAAGTGCT TCTGTCTCTT CTAAATATGG TGAACGTAAC
TATCTCCGCC GATGAGCTCA CCAAAGGCAA CGCGACGCTC TTAGTCATTG TATCTCCGTC
CTCATTTTAT CTCAATACTT TTTACGTAGT TATCTCCTTT CAGTATGGTG ATGTGGATCT
ACAAGCGCGA TGGGCGCAAG GAGCCTGGTG AGTGGCAGTC ATTGATGCGT TCTTCTCAAA
GCCACGCTGA CAGTACTTAC AGTGGCTTTT GACAAGGTAT GTCTCATAGT GTCTTTCAAA
ATCAAGGCAA ACCGCTGCAA AATGTTCTCG TATTCTGACA TTTGATTTTG CGACGTTTCA
ACTAGGTTAC TGCACGAGTG AGTGATTGCT CGATTTTTTT GTCCTGGACG CGTCAGTGCT
AATGTTTGGT AAATAGATCA ACAAACTTTC ATATGGTCTT GATCCCAACT TCGTCGAGCC
GGCCGAAATC ACCCAGAAGG TCGTCCAAGG TATCCACGCT GGTATTACCA CTGTTGAACT
CGACGTAAGT TCACGTGTTT GTTCACTTGA CGCGTCATGC ATCGCTCATC GCCTGCCATA
GAATCTCGCA GCTGAAACTG CCGCTTACCT TACCACCAAA CACCCAGATT ATGCTATTCT
TGCTGCCCGA ATCGCCATTT CCAACCTTCA CAAGGAGACC AAGAAGGTTT TCTCTGCCGT
CGTGCATGAC CTACATGCAT GGGTCAACCC CAAGACCGGC AAGCATTCTC CCATGATTGA
TGATGACGTC TATAAGATTG TCATGGACAA CAAGGATATT CTCGACTCTG CCATTATCTA
TGACAGAGAC TTTGCCTACA ACTACTTTGG TTTCAAGACT CTTGAGAGAT CATACCTTCT
CAGGATCAAT GGCAAGATTG TCGAGCGCCC TCAGCACATG ATCATGCGAG TCGCCGTGGG
TATCCACGGT TCCAACATTG ACAAAGTGAT CGAGACCTAT AACCTTATGT CTGAAAGGTA
TTTCACCCAT GCTTCCCCCA CTGTAAGTTA TTCAACCAGT TGTGAAAGGT CTGTTGCCGA
CAAATATAAC AGCTTTTCAA TGCCGGAACT CCCCGACCCC AAATGTCATC ATGCTTCCTC
GTGGCCATGA AAGATGATTC CATTGATGGT ATCTACGATA CTCTCAAGAC CTGTGCTCAG
ATCTCCAAGA CTGCCGGTGG TATTGGTCTT CACATTCATA ATATCCGTGC GAAGGGCTCC
TACATTGCCG GAACCAATGG TTACTCCAAC GGTATCATTC CTATGCTCCG AGCTTACGAT
GCCACCGCAC GATACGTTGA CCAAGGTGGT AATAAGCGTC CTGGTGCCTT CGCCATCTAT
CTTGAGCCTT GGCACGCTGA TGTGTTTGAC TTCATTGACT TAAGGAAGAA TCATGGTAAG
GAGGAGGTAC GAGCTCGTGA TCTTTTCTAC GCCCTCTGGA TCCCCGACCT TTTCATGAAG
CGTGTCGAAT CCGATGGAGA CTGGACTCTT ATGTGTCCCG CCGAGTGCCC TGGACTTGCC
GACGTATACG GAGAAGAATT TGAGAAGCTC TATGAGAGCT ACGAGAGGAA AGGCAAGGGG
AGAAAAACTA TCAAGGCCCA GAAGCTTTGG TTCGCCATCC TCGAGGCTCA GACCGAGACC
GGTGTCCCTT ACATTTGCTA CAAGGATGCC GCCAACTCCA AATCCAACCA AAAGCAGCTT
GGTACCATCA AATCCAGTAA CCTCTGTACT GAAATCATGG AATATTCTTC TCCTGATGAG
GTTGCTGTCT GTAATCTTGC TTCCCTTGCT CTTCCTGCCT TCGTGGACCT TGAACGTCGC
GTTTACGATT TCAAAAAGCT GCATGAGATT ACCAAGGTTG TTACCAAGAA CCTCGACACT
GTCATCACCC GTAACTATTA TCCAGTGCCT GAGGCCCGTA ACTCCAACAT GCGTCATCGA
CCTGTTGGCC TTGGTGTGCA GGGTCTCGCC GACGCTTTCA TGGCACTTCG CATGCCGTTC
GACTCTCCTG AGGCTAGAGA GCTCAATATC CAGATCTTCG AGACCATTTA CCACGCAGCG
CTTGAGGCCT CATGCGAACT CGCCGAGGAG TTTGGTACCT ATGAGTCTTA CGAAGGTTCT
CCCATTTCTA AAGGTATCCT TCAGTACGAC ATGTGGGGTC GTGTTCCCAC CGACCTTTGG
GACTGGACTG AGTTGAAGGC AAAGATCGCA CAACACGGTG TGAGGAACTC TCTGCTCGTC
GCCCCTATGC CTACTGCCTC AACTTCTCAA ATCTTGGGTT GGAACGAATG GTGAGCAATT
CCATGCTAGC CATTTTCTTG CTGTACTGAT TATACCTTTA GCTTTGAACC TTACACTTCG
ATGCTTTACG CTCGACGGGT ACTTTCTGGC GATTTCCAAG TGGTCTGCCC TTGGTTGTTG
CGAGACCTCA TCAACCTTGA CCTTTGGGAC GACAACATGA AGCAGCTTAT CATTGCCGCC
GGCGGTTCCA TTCAGTCCAT CCCCAACATT CCCGATGATC TCAAGAAGAT TTATCGAACA
GTCTGGGAGA TTTCGCAGAA GGCTGTCATC GACCTTGCGG CTGACCGAGG AGCTTTCATT
GACCAGTCCC AGTCCCTTAA CATCCATCTC TCCAACCCCT CGTTCCCTCA GCTCACTTCC
ATGCACTTCT ATGGATGGAA GCGAGGCCTC AAGACGGGTT GCTATTACCT TCGAACCCGT
CCTTCCGCCA ACGCCATCCA GTTTACTGTT GATGCTTCCA CTCTCAAGAC TGCGAAGAGC
CTCAACTCCA GTGCCAAACC CTCTCCGACC CCTTCTCCTG CTCCCGGTGC AAGTCGCGCC
ACTGCAGACA GTCTCGTGCA ACCCATGAGG AAGGTCACCA TTGCCACCAC TGCTTCCCAT
CACCCCCCTC AGCCCGATGA AACAAATGAC TCAAGGTCCC GTGACAGAAG CCCTCAGCCT
AGCGAGGAAG AGGAGATCAC CTACGAAGAG GCGAAGAAGC GCGCTGAAGA GAGAGCCGAA
GCGGCGTTGC AATGTAGTAT TGAGAACAAG GACGCCTGTG TCATGTGCTC TGGATAGGGG
CGTGCAGGTC GCGCAAGGAA AGATTAAAAG TAAGAGTAAT TCAG
|
|---|
| Protein sequence | MVMWIYKRDG RKEPVAFDKV TARINKLSYG LDPNFVEPAE ITQKVVQGIH AGITTVELDN
LAAETAAYLT TKHPDYAILA ARIAISNLHK ETKKVFSAVV HDLHAWVNPK TGKHSPMIDD
DVYKIVMDNK DILDSAIIYD RDFAYNYFGF KTLERSYLLR INGKIVERPQ HMIMRVAVGI
HGSNIDKVIE TYNLMSERYF THASPTLFNA GTPRPQMSSC FLVAMKDDSI DGIYDTLKTC
AQISKTAGGI GLHIHNIRAK GSYIAGTNGY SNGIIPMLRA YDATARYVDQ GGNKRPGAFA
IYLEPWHADV FDFIDLRKNH GKEEVRARDL FYALWIPDLF MKRVESDGDW TLMCPAECPG
LADVYGEEFE KLYESYERKG KGRKTIKAQK LWFAILEAQT ETGVPYICYK DAANSKSNQK
QLGTIKSSNL CTEIMEYSSP DEVAVCNLAS LALPAFVDLE RRVYDFKKLH EITKVVTKNL
DTVITRNYYP VPEARNSNMR HRPVGLGVQG LADAFMALRM PFDSPEAREL NIQIFETIYH
AALEASCELA EEFGTYESYE GSPISKGILQ YDMWGRVPTD LWDWTELKAK IAQHGVRNSL
LVAPMPTAST SQILGWNECF EPYTSMLYAR RVLSGDFQVV CPWLLRDLIN LDLWDDNMKQ
LIIAAGGSIQ SIPNIPDDLK KIYRTVWEIS QKAVIDLAAD RGAFIDQSQS LNIHLSNPSF
PQLTSMHFYG WKRGLKTGCY YLRTRPSANA IQFTVDASTL KTAKSLNSSA KPSPTPSPAP
GASRATADSL VQPMRKVTIA TTASHHPPQP DETNDSRSRD RSPQPSEEEE ITYEEAKKRA
EERAEAALQC SIENKDACVM CSG
|
|---|
| |