Gene CNE03320 details

Gene Information

• Locus tag: CNE03320
• ID: 3257711
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 945498
• End bp: 947614
• Gene Length: 2117 bp
• Protein Length: 584 aa
• GC content: 50%
• IMG OID: 638256915
• Product: small nuclear ribonucleoprotein, putative
• Protein accession: XP_570894
• Protein GI: 58267476
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCATATTCA CAAGCATGTC AGGCTCCCTC ACCCACGTCC TCTTCGAGGG GCCTTCTGGC 
TATGGCCTCT TCACTGTCAA CTTGCAGGAG GAAGTTGCTG CCAAGTCAAA ACAACTTCAA 
GACTCCATCG CCGACCTCGG CATCTTCTCT CGAATGGTCC AGCTCGCTTC CTTCGCCCCT 
TTTACTTCGG CCGCCCAAGC TCTCGAGAAC GCGAACGATG TCTCCGAAGG CGTCCTCAAC 
CCTCACCTTC AGGCTCTTCT AAATTTGATC GTCCCCGACG CTGCTGGCAA GGGCAACAAG 
AAGCAATCCG GTGTTCTTCT CGGTGTGGCC GAGAGAGGTT TGGCTGGTGC CATTCAAGGC 
GAGATGGGTA TCCCCTGTGA CACTTCCGAA CGAGCCTTGG AACTCATCCG AGGTGTTCGA 
TTACATCAGG AAAAGATTTT GATCAAGGGA GGGATGCAAA AGGGAGATGT AACCGTTGCC 
CAGCTTGGTT TGGGTCACTC TTACTCTCGA GGCAAGGTGA AGGTATGTGC AAATGCGTAT 
AGTACTTGAG ACATTGGACT TATCGGATAT AGTTCAACGT CAACCGATCC GACAACATGA 
TTATCCAAGC CATTTCTCTC TCCGACCAAC TCGACAAAGA TCTCAACACT TTCTTCATGC 
GAGTGCGAGA ATGGTACGGC TGGCACTTCC CTGAGCTTTA CAAGCTCGTT CCCGACGCCC 
ACCAATATGC CCTTCTTGCT GTCCTTATCG GTGATCGCAC AGCTCTTTCC GAGGACTCTC 
TTGAGGAAAT GCAGGAAATT CTTGACGACG ACGAGACTCG TGCGAAGAAT GTCCTCGATG 
CCGCGAGGGC CAGTATGGGT AGTGACATCA GCGAAGTTGA CTTGATCAAC ATCAGCAACT 
TCGCGGAGAG GGTTGTCAAG CTTGCTGAGT ATAGGAAGAG CTTGAGGAGA TACCTCACTG 
AGAAGATGAA TGTCGTTGCC CCCAACTTGT CAGCTTTGAT CGGTGAGACC ATCGCTGCCA 
GACTCATCAG CCATGCGTAT GTCCTTTTTT CTTCCTTTGA AACAAAGATC AATGATTTGT 
TGACGATACA TTAGCGGTTC CCTCACCAAC TTGGCCAAGT ACCCCGCTTC TACTGTCCAA 
ATCCTCGGTG CCGAAAAGGC ACTTTTCCGA GCTCTCAAGA CCAAGGGTAA CACCCCCAAA 
TACGGTCTCA TCTACCACTC TACTTTTATC GGCCGTGCCG GTGCTAAGCA CAAGGGTCGG 
ATTTCTCGAT TCCTTGCCAA TAAATGTTCT ATCGCTTGTC GTATTGACTG TTTCACCGAC 
GTTCCTACCA ACAAATTCGG AGAGGCTTTA CGTGCACAGG TCGAGGAACG TTTGAACTTC 
TTCGAGGTAA GCCGCCATCA TTTCTGAAAG TTAGTTGTGA TACTTATTGC TATAATAGAC 
TGGTGCTCCC GTCGGCAAAA ACTCTGACGC CATCCAGAAG GCCTTGGCCG CTGTCGCAGC 
TGACCTCGAT GACGAGGACG ACGATGATGA CGATGAAGGT CATCTTAAGG AAGATGATGT 
TGCGGATGTA TGTTACCATT CTAATGATTT GTTTGCCGTA TCCACGCTAA CCCTTTCTAG 
GCTGTCAAGC AGGTAGAGAA GGACCAAGCA GAAGCTGCCG TTAACCGAGG CCCTATTGAC 
CCCGAACTTG CCAAACTTGC TTCTGAGGCT ACATCTTCTA CGCCTAAGAA GGAAAAGAAG 
AACAAAAAGG AGAAGAAGGA CAAGAAGGAG AAGGAGGAAA AGAAGAAGCG CAAGTCCGAA 
GCCATGGACG TGGATGTGAA GGAGGATGAG GAGGAGAAGA AGGAGAAGAA GAGCAAGAAG 
GAGAAGGAGG AAAAGAAGGA GAAGAAGGAA AAGAAGGAGA AGAAGGAGAA GAAGGAGAAA 
GAGGGAAGGG AAGAGAAGGA GGGAAAGAAG GAGAAGAAGA AGAAGAGGAA GTCTGAGGCG 
TAGAGAGTTG CTGTGGCGTG GAGAGGCTGC TAGCAAGTGG TGGGGTCATG ACCGGGGCGG 
CTTGCATTCT TTCTTCATTT TTTCTCATCC CATATGGCTT GTTCTTTCGT TTTGTCTATT 
TTACATGTAT ACCCGTT 

 

Protein sequence

MSGSLTHVLF EGPSGYGLFT VNLQEEVAAK SKQLQDSIAD LGIFSRMVQL ASFAPFTSAA 
QALENANDVS EGVLNPHLQA LLNLIVPDAA GKGNKKQSGV LLGVAERGLA GAIQGEMGIP 
CDTSERALEL IRGVRLHQEK ILIKGGMQKG DVTVAQLGLG HSYSRGKVKF NVNRSDNMII 
QAISLSDQLD KDLNTFFMRV REWYGWHFPE LYKLVPDAHQ YALLAVLIGD RTALSEDSLE 
EMQEILDDDE TRAKNVLDAA RASMGSDISE VDLINISNFA ERVVKLAEYR KSLRRYLTEK 
MNVVAPNLSA LIGETIAARL ISHAGSLTNL AKYPASTVQI LGAEKALFRA LKTKGNTPKY 
GLIYHSTFIG RAGAKHKGRI SRFLANKCSI ACRIDCFTDV PTNKFGEALR AQVEERLNFF 
ETGAPVGKNS DAIQKALAAV AADLDDEDDD DDDEGHLKED DVADAVKQVE KDQAEAAVNR 
GPIDPELAKL ASEATSSTPK KEKKNKKEKK DKKEKEEKKK RKSEAMDVDV KEDEEEKKEK 
KSKKEKEEKK EKKEKKEKKE KKEKEGREEK EGKKEKKKKR KSEA